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@populationgenomics

Centre for Population Genomics

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  1. talos talos Public

    Rare Disease variant reanalysis tool

    Python 8 6

  2. production-pipelines production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    Python 7 1

  3. cpg-cost-control cpg-cost-control Public

    A Cloud Function to handle GCP billing budget notifications.

    Python 6 3

  4. cuKING cuKING Public

    CUDA-based KING relatedness estimation

    Cuda 6

  5. cpg-infrastructure cpg-infrastructure Public

    This repository is used to manage the infrastructure at the CPG

    Python 4 1

  6. seqr seqr Public

    Forked from broadinstitute/seqr

    web-based analysis tool for rare disease genomics

    Python 3 1

Repositories

Showing 10 of 79 repositories
  • sv-workflows Public

    Structural Variation Workflows

    populationgenomics/sv-workflows’s past year of commit activity
    Python 1 MIT 1 2 11 Updated May 10, 2025
  • talos Public

    Rare Disease variant reanalysis tool

    populationgenomics/talos’s past year of commit activity
    Python 8 MIT 6 10 4 Updated May 9, 2025
  • talos_manuscript Public
    populationgenomics/talos_manuscript’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 1 Updated May 9, 2025
  • images Public

    Reusable single-software docker images

    populationgenomics/images’s past year of commit activity
    Dockerfile 1 MIT 2 1 10 Updated May 9, 2025
  • analysis-runner Public
    populationgenomics/analysis-runner’s past year of commit activity
    Python 2 MIT 4 7 (1 issue needs help) 4 Updated May 9, 2025
  • dragen_align_pa Public
    populationgenomics/dragen_align_pa’s past year of commit activity
    Python 0 MIT 0 1 0 Updated May 9, 2025
  • production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    populationgenomics/production-pipelines’s past year of commit activity
    Python 7 MIT 1 48 (1 issue needs help) 40 Updated May 8, 2025
  • cpg-flow Public

    CPG Pipeline Python API

    populationgenomics/cpg-flow’s past year of commit activity
    Python 0 MIT 0 4 3 Updated May 8, 2025
  • metamist Public

    Sample level metadata system

    populationgenomics/metamist’s past year of commit activity
    Python 3 MIT 2 41 23 Updated May 8, 2025
  • cpg-utils Public

    Library of convenience functions specific to the CPG

    populationgenomics/cpg-utils’s past year of commit activity
    Python 0 MIT 1 2 1 Updated May 8, 2025
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