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SPUTNIK Public
SPUTNIK R package
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juicer Public
Forked from aidenlab/juicerA One-Click System for Analyzing Loop-Resolution Hi-C Experiments
Shell MIT License UpdatedMay 30, 2025 -
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byte_converter Public
Simple data units converter in PyQT5
Python GNU General Public License v3.0 UpdatedMar 17, 2024 -
mutools3D-imperial Public
Forked from UK-Digital-Heart-Project/mutools3DR package for Mass Univariate Analysis of 3D Phenotypes
R GNU General Public License v3.0 UpdatedMar 16, 2024 -
ecgxai Public
Forked from UMCUtrecht-ECGxAI/ecgxaiNeatly packaged AI methods for explainable ECG analysis
Python GNU Affero General Public License v3.0 UpdatedOct 12, 2023 -
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ukbb_cardiac Public
Forked from baiwenjia/ukbb_cardiacSome code for processing and analysing UK Biobank cardiac MR images.
Python Apache License 2.0 UpdatedDec 1, 2022 -
DESI_MSI_recal Public
Companion code for the publication: Inglese, P., Huang, H., Wu, V., Lewis, M.R. and Takats, Z., 2021. Mass recalibration for desorption electrospray ionization mass spectrometry imaging using endog…
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genomicscourse Public archive
Forked from wurmlab/genomicscourseFor QMUL's Genome Bioinformatics MSc module BIO721P & SIB's Spring school in bioinfo & population genomics
HTML UpdatedAug 4, 2022 -
pyimzML Public
Forked from alexandrovteam/pyimzMLA parser to read .imzML files with python
Python Apache License 2.0 UpdatedJan 1, 2022 -
SimpleITK-Notebooks Public
Forked from InsightSoftwareConsortium/SimpleITK-NotebooksJupyter notebooks for learning how to use SimpleITK
Jupyter Notebook Apache License 2.0 UpdatedNov 16, 2021 -
MALDIquant Public
Forked from sgibb/MALDIquantQuantitative Analysis of Mass Spectrometry Data
R UpdatedOct 28, 2021 -
hexSticker Public
Forked from GuangchuangYu/hexSticker✨ Hexagon sticker in R
R UpdatedOct 20, 2021 -
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videos Public
Forked from 3b1b/videosCode for the manim-generated scenes used in 3blue1brown videos
Python UpdatedOct 12, 2021 -
HGP-SL Public
Forked from cszhangzhen/HGP-SLHierarchical Graph Pooling with Structure Learning
Python UpdatedJul 12, 2021 -
Blacklist Public
Forked from Boyle-Lab/BlacklistApplication for making ENCODE Blacklists
C++ GNU General Public License v3.0 UpdatedApr 23, 2021 -
ion_colocalization Public
Scripts used for the paper Inglese, P., Correia, G., Pruski, P., Glen, R. C., & Takats, Z. (2019). Colocalization features for classification of tumors using desorption electrospray ionization mass…
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Graph-U-Nets Public
Forked from HongyangGao/Graph-U-NetsPytorch implementation of Graph U-Nets (ICML19)
Python GNU General Public License v3.0 UpdatedSep 17, 2020 -
Monte Carlo Reference-based Consensus Clustering
R UpdatedMar 14, 2020 -
4Dsegment Public
Forked from j-duan/4DsegmentDeep learning cardiac segmentation and motion tracking
Python GNU General Public License v3.0 UpdatedNov 12, 2019 -
4Dsegment2.0 Public
Forked from UK-Digital-Heart-Project/4Dsegment2.0Python GNU General Public License v3.0 UpdatedMay 28, 2019 -
SPUTNIKexamples Public
Repository for the two data examples used in SPUTNIK R package
GNU General Public License v3.0 UpdatedFeb 16, 2018 -
VaDE Public
Forked from slim1017/VaDEPython code for paper - Variational Deep Embedding : A Generative Approach to Clustering
Python UpdatedFeb 14, 2018 -
3D_DESI Public
MATLAB scripts for the paper "Deep learning and 3D-DESI imaging reveal the hidden metabolic heterogeneity of cancer"
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