Stars
code for the SE3 Transformers paper: https://arxiv.org/abs/2006.10503
An implementation of the DeepMind's AlphaFold based on PyTorch for research
The next generation of Infrastructure-as-Code. Work with high-level constructs instead of getting lost in low-level cloud configuration.
Python packaging and dependency management made easy
Synthego ICE - Inference of CRISPR Editing software
Reference implementations of popular deep learning models.
A quality control analysis tool for high throughput sequencing data
Web user interface for the Terra platform
FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine
Example usage of the Benchling API: https://docs.benchling.com/
Completely unstyled, fully accessible UI components, designed to integrate beautifully with Tailwind CSS.
svg react icons of popular icon packs
Material Design for React Native (Android & iOS)
From the Transistor to the Web Browser, a rough outline for a 12 week course
FastAPI framework, high performance, easy to learn, fast to code, ready for production
Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
State of the art Semantic Sentence Embeddings
ULMFiT for Genomic Sequence Data
Parameter-efficient embeddings for proteins, pretrained using a contrastive loss.
Official codebase for Decision Transformer: Reinforcement Learning via Sequence Modeling.
ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy
Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.