Stars
QUILT: Low coverage whole genome sequence imputation with large reference panels
Short Read Sequence Typing for Bacterial Pathogens
A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category
MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
An extremely fast Python package and project manager, written in Rust.
Batch effect adjustment based on negative binomial regression for RNA sequencing count data
A genome completeness evaluation tool based on miniprot
Generate Markdown and PowerPoint slides from a folder of images, code snippets, and other files.
Select, put and delete data from JSON, TOML, YAML, XML and CSV files with a single tool. Supports conversion between formats and can be used as a Go package.
Faker is a Python package that generates fake data for you.
simstudy: Illuminating research methods through data generation
Foreign Contamination Screening caller scripts and documentation
ClickHouse® is a real-time analytics database management system
Fast, light, simple Docker containers & Linux machines
Dataframes powered by a multithreaded, vectorized query engine, written in Rust
1 Line of code data quality profiling & exploratory data analysis for Pandas and Spark DataFrames.
Scalable gVCF merging and joint variant calling for population sequencing projects
A complete tool set for molecular QTL discovery and analysis
GIF encoder based on libimagequant (pngquant). Squeezes maximum possible quality from the awful GIF format.
brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan