PyMOD3.0.2 throws error in PyMOL 3.1 incentive version on Mac OS · Issue #15 · pymodproject/pymod · GitHub
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I am using PyMOL 3.1.3 on Mac OS Sequoia with a M4 chip.
A popup window says
cannot import name 'dict_of_matrices' from 'pymod_lib.pymod_vars' (/Users/blaine/.pymol/startup/pymod3/pymod_lib/pymod_vars.py)
The backtrace is
Traceback (most recent call last):
File "/Users/blaine/.pymol/startup/pymod3/__init__.py", line 298, in startup_pymod
from pymod_lib import pymod_main
File "/Users/blaine/.pymol/startup/pymod3/pymod_lib/pymod_main/__init__.py", line 37, in <module>
from ._development import PyMod_development
File "/Users/blaine/.pymol/startup/pymod3/pymod_lib/pymod_main/_development.py", line 12, in <module>
from pymod_lib.pymod_seq.seq_star_alignment import global_pairwise_alignment_cs
File "/Users/blaine/.pymol/startup/pymod3/pymod_lib/pymod_seq/seq_star_alignment.py", line 12, in <module>
from pymod_lib.pymod_vars import dict_of_matrices
ImportError: cannot import name 'dict_of_matrices' from 'pymod_lib.pymod_vars' (/Users/blaine/.pymol/startup/pymod3/pymod_lib/pymod_vars.py)
The text was updated successfully, but these errors were encountered:
Hi,
Thank you for reporting this issue. Unfortunately, I was unable to
reproduce the error on my end.
Could you please provide more details to help us investigate further?
Specifically:
- How was PyMOL installed (e.g., via conda, Homebrew, official
installer)?
- Which version of Biopython are you using?
- Any additional relevant environment details (e.g., OS, Python version)?
With this information, we can better diagnose the problem.
Best,
Serena
Il giorno mar 4 feb 2025 alle ore 00:18 Blaine Mooers <
***@***.***> ha scritto:
A popup window says
cannot import name 'dict_of_matrices' from 'pymod_lib.pymod_vars' (/Users/blaine/.pymol/startup/pymod3/pymod_lib/pymod_vars.py)
The backtrace is
Traceback (most recent call last):
File "/Users/blaine/.pymol/startup/pymod3/__init__.py", line 298, in startup_pymod
from pymod_lib import pymod_main
File "/Users/blaine/.pymol/startup/pymod3/pymod_lib/pymod_main/__init__.py", line 37, in <module>
from ._development import PyMod_development
File "/Users/blaine/.pymol/startup/pymod3/pymod_lib/pymod_main/_development.py", line 12, in <module>
from pymod_lib.pymod_seq.seq_star_alignment import global_pairwise_alignment_cs
File "/Users/blaine/.pymol/startup/pymod3/pymod_lib/pymod_seq/seq_star_alignment.py", line 12, in <module>
from pymod_lib.pymod_vars import dict_of_matrices
ImportError: cannot import name 'dict_of_matrices' from 'pymod_lib.pymod_vars' (/Users/blaine/.pymol/startup/pymod3/pymod_lib/pymod_vars.py)
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I am using PyMOL 3.1.3 on Mac OS Sequoia with a M4 chip.
A popup window says
The backtrace is
The text was updated successfully, but these errors were encountered: