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A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.

Jupyter Notebook 1,579 92 Updated Apr 22, 2025

Near-optimal RNA-Seq quantification

C 688 174 Updated Apr 9, 2025

Tools for working with SAM/BAM data

D 590 107 Updated Dec 22, 2024

Lithium - A simple responsive Hugo theme

CSS 121 176 Updated Aug 25, 2019

Toolkit for processing sequences in FASTA/Q formats

C 1,468 312 Updated Jun 1, 2025

fastqcr: Quality Control of Sequencing Data

R 73 26 Updated Aug 3, 2023

Java tools for analyzing Drop-seq data

Java 128 35 Updated Jun 7, 2025

SRA Tools

C 1,218 259 Updated Jun 6, 2025

Very simple, pure python, BAM file reader

Python 3 3 Updated Sep 16, 2022

It's time to move on from iris

R 12 Updated Jun 11, 2020

A pipeline for analyzing DNA methylation data from bisulfite sequencing.

C++ 70 27 Updated Oct 7, 2022

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

HTML 423 108 Updated Apr 22, 2025

An opinionated view of the Tidyverse "dialect" of the R language.

TeX 536 47 Updated Apr 22, 2025

Avatars for Zoom, Skype and other video-conferencing apps.

Python 16,453 4,271 Updated Aug 30, 2024

πŸŒ€ Learn R, in R.

R 1,169 596 Updated Oct 27, 2023

The Composer of ggplots

R 2,547 165 Updated Mar 25, 2025

🎨 Game of Thrones inspired palette for R

HTML 81 13 Updated Oct 6, 2022

A crash course in six episodes for software developers who want to become machine learning practitioners.

Jupyter Notebook 2,817 913 Updated May 3, 2024

This is a R package for alignment of DIA mass-spec data

R 12 7 Updated Feb 24, 2021

A word cloud geom for ggplot2

R 175 8 Updated Jun 1, 2024

A RStudio addin for ggplot2 theme tweaking

R 500 44 Updated Jun 15, 2019

R Package for Analyzing John Snow's 1854 Cholera Map

R 134 14 Updated May 16, 2025

Track changes in data with ease

R 66 4 Updated Jun 14, 2024

An R-focused pipeline toolkit for reproducibility and high-performance computing

R 1,342 128 Updated Dec 4, 2024

πŸš€ R package: future: Unified Parallel and Distributed Processing in R for Everyone

R 984 89 Updated Jun 5, 2025

Quick, beautiful and customizable dashboard template for Shiny based on shiny.semantic and Fomantic UI.

R 257 43 Updated Apr 18, 2024

The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.

Python 25 8 Updated Jun 3, 2025

A Tool for automated Optimization of XCMS Parameters

R 34 21 Updated Nov 27, 2022

This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis

R 200 82 Updated Jun 8, 2025

Shiny Dashboarding framework

CSS 913 297 Updated Apr 22, 2025
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