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  • multiPrime Public

    multiPrime is a mismatch-tolerant minimal primer set design tool for large and diverse sequences (e.g. Virus). Here is a web-based version (test: http://multiPrime.cn)

    Python 447 39 MIT License Updated Feb 28, 2025
  • GraffiTE Public

    Forked from cgroza/GraffiTE

    GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.

    R Other Updated Nov 29, 2024
  • cf-mirror Public

    Forked from adysec/mirror

    AdySec CF拉平镜像站 | 官方源可信度和稳定性最高,但国内访问速度较慢,通过众生平等Cloudflare,利用全球的边缘节点,将用户请求转发到离用户距离最近的节点,同时缓存静态内容加速,减少网络延迟和下载速度,使用Cloudflare Workers配置反代实现

    JavaScript Creative Commons Zero v1.0 Universal Updated Aug 13, 2024
  • Shell Creative Commons Zero v1.0 Universal < 10000 /span> Updated Jul 1, 2024
  • GEMMA Public

    Forked from genetics-statistics/GEMMA

    Genome-wide Efficient Mixed Model Association

    C++ GNU General Public License v3.0 Updated May 3, 2024
  • joybio Public

    Config files for my GitHub profile.

    Updated Mar 26, 2024
  • This script is designed to automate the process of generating circular phylogenetic tree visualizations using Graphlan

    R 1 Updated Mar 10, 2024
  • multiPrime2-GUI: Designing degenerate primers for maximum coverage with minimal degeneracy.

    Python 66 10 Updated Dec 22, 2023
  • run roary for MAGs within the identical species

    R Updated Dec 22, 2023
  • Junbo Public

    Updated Oct 31, 2023
  • LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files

    Perl MIT License Updated Oct 5, 2023
  • Shell Updated Sep 28, 2023
  • inStrain Public

    Forked from MrOlm/inStrain

    Bioinformatics program inStrain

    Python MIT License Updated Aug 24, 2023
  • hello-algo Public

    Forked from krahets/hello-algo

    《Hello 算法》:动画图解、一键运行的数据结构与算法教程,支持 Java, C++, Python, Go, JS, TS, C#, Swift, Rust, Dart, Zig 等语言。

    Java Other Updated Jul 26, 2023
  • hget Public

    Forked from yodeng/hget

    interruptable, resumable download accelerator

    Python MIT License Updated Jul 14, 2023
  • TBtools Public

    Forked from CJ-Chen/TBtools-II

    GUI/CommandLine Tool Box for biologistists to utilize NGS data.

    Shell Updated Jun 29, 2023
  • DearPyGui Public

    Forked from hoffstadt/DearPyGui

    Dear PyGui: A fast and powerful Graphical User Interface Toolkit for Python with minimal dependencies

    C++ MIT License Updated Jun 28, 2023
  • fsplit Public

    Forked from yodeng/fsplit

    for split fastq from mix bcl or fastq data by barcode/index

    Python MIT License Updated Jun 21, 2023
  • script Public

    Forked from adysec/script

    VPS测试脚本

    Updated Jun 16, 2023
  • Genome annotation with AUGUSTUS

    C++ Updated Jun 11, 2023
  • PyWebIO Public

    Forked from pywebio/PyWebIO

    Write interactive web app in script way.

    Python MIT License Updated Jun 4, 2023
  • 为GPT/GLM提供图形交互界面,特别优化论文阅读润色体验,模块化设计支持自定义快捷按钮&函数插件,支持代码块表格显示,Tex公式双显示,支持Python和C++等项目剖析&自译解功能,PDF/LaTex论文翻译&总结功能,支持并行问询多种LLM模型,支持清华chatglm等本地模型。兼容复旦MOSS, llama, rwkv, 盘古等。

    Python GNU General Public License v3.0 Updated May 22, 2023
  • iqtree2 Public

    Forked from iqtree/iqtree2

    NEW location of IQ-TREE software for efficient phylogenomic software by maximum likelihood http://www.iqtree.org

    C++ GNU General Public License v2.0 Updated May 17, 2023
  • rust-mdbg Public

    Forked from ekimb/rust-mdbg

    minimizer-space de Bruijn graphs (mdBG) for whole genome assembly

    Rust MIT License Updated Apr 28, 2023
  • runjob Public

    Forked from yodeng/runjob

    runjob is a program for managing a group of related jobs running on a compute cluster

    Python MIT License Updated Apr 14, 2023
  • R 1 Updated Apr 13, 2023
  • primer3-py Public

    Forked from libnano/primer3-py

    Simple oligo analysis and primer design

    C GNU General Public License v2.0 Updated Apr 12, 2023
  • m6A-seq Public

    Python 2 Updated Apr 11, 2023
  • picrust2 Public

    Forked from picrust/picrust2

    Code, unit tests, and tutorials for running PICRUSt2

    Python GNU General Public License v3.0 Updated Apr 5, 2023
  • 📊 A universal enrichment tool for interpreting omics data

    R Updated Mar 20, 2023
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