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MMaDA Public
Forked from Gen-Verse/MMaDAMMaDA - Open-Sourced Multimodal Large Diffusion Language Models
Python MIT License UpdatedJun 13, 2025 -
DeFoG Public
Forked from manuelmlmadeira/DeFoGOfficial implementation of the paper: "DeFoG: Discrete Flow Matching for Graph Generation"
Python MIT License UpdatedJun 6, 2025 -
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UniMoMo Public
Forked from kxz18/UniMoMoCodes for our paper "UniMoMo: Unified Generative Modeling of 3D Molecules for De Novo Binder Design" (ICML 2025)
Python MIT License UpdatedJun 3, 2025 -
dplm Public
Forked from bytedance/dplmThe Family of Diffusion Protein Language Models (DPLM)
Python Apache License 2.0 UpdatedMay 28, 2025 -
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caduceus Public
Forked from kuleshov-group/caduceusBi-Directional Equivariant Long-Range DNA Sequence Modeling
Python Apache License 2.0 UpdatedJun 11, 2024 -
DeepPurpose Public
Forked from kexinhuang12345/DeepPurposeA Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)
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adapters Public
Forked from adapter-hub/adaptersA Unified Library for Parameter-Efficient and Modular Transfer Learning
Jupyter Notebook Apache License 2.0 UpdatedJun 5, 2024 -
x-transformers Public
Forked from lucidrains/x-transformersA simple but complete full-attention transformer with a set of promising experimental features from various papers
Python MIT License UpdatedJun 4, 2024 -
awesome-AI4ProteinConformation-MD Public
Forked from AspirinCode/awesome-AI4MolConformation-MDList of protein (enzymes and PPIs) conformations and molecular dynamics using generative artificial intelligence and deep learning
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Awesome_Mamba Public
Welcome to the world of Mamba! This repository is a curated collection of papers, tutorials, videos, and other valuable resources related to Mamba.
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LDM-3DG Public
Forked from Shen-Lab/LDM-3DG[ICLR 2024] "Latent 3D Graph Diffusion" by Yuning You, Ruida Zhou, Jiwoong Park, Haotian Xu, Chao Tian, Zhangyang Wang, Yang Shen
Python GNU General Public License v3.0 UpdatedMay 3, 2024 -
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Str2Str Public
Forked from lujiarui/Str2StrCodebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)
Python MIT License UpdatedMar 7, 2024 -
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torchmd Public
Forked from torchmd/torchmdEnd-To-End Molecular Dynamics (MD) Engine using PyTorch
Python MIT License UpdatedFeb 22, 2024 -
awesome-self-supervised-gnn Public
Forked from ChandlerBang/awesome-self-supervised-gnnPapers about pretraining and self-supervised learning on Graph Neural Networks (GNN).
Python UpdatedFeb 2, 2024 -
AI2BMD Public
Forked from microsoft/AI2BMDAI-powered ab initio biomolecular dynamics simulation
MIT License UpdatedDec 11, 2023 -
chroma Public
Forked from generatebio/chromaA generative model for programmable protein design
Python Apache License 2.0 UpdatedNov 20, 2023 -
MolCA Public
Forked from eltociear/MolCACode for EMNLP2023 paper "MolCA: Molecular Graph-Language Modeling with Cross-Modal Projector and Uni-Modal Adapter".
Python UpdatedNov 5, 2023 -
FABind Public
Forked from QizhiPei/FABindFABind: Fast and Accurate Protein-Ligand Binding (NIPS 2023)
Python MIT License UpdatedOct 11, 2023 -
ChatPaper Public
Forked from kaixindelele/ChatPaperUse ChatGPT to summarize the arXiv papers. 全流程加速科研，利用chatgpt进行论文全文总结+专业翻译+润色+审稿+审稿回复
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Awesome-Hypergraph-Network Public
Forked from gzcsudo/Awesome-Hypergraph-NetworkA curated list of Hypergraph Learning, Hypergraph Theory, Hypergraph Dataset and Hypergraph Tool.
UpdatedSep 19, 2023 -
chemprop Public
Forked from chemprop/chempropMessage Passing Neural Networks for Molecule Property Prediction
Python MIT License UpdatedSep 13, 2023 -
SGGRL Public
Forked from Vencent-Won/SGGRLThe implementation of the paper "Multi-Modal Representation Learning for Molecular Property Prediction: Sequence, Graph, Geometry".
Python UpdatedSep 11, 2023
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