10000 refactor: split segmenter into its own base class by JoanFM · Pull Request #1632 · jina-ai/serve · GitHub
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refactor: split segmenter into its own base class #1632

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26 changes: 2 additions & 24 deletions jina/drivers/craft.py
Original file line number Diff line number Diff line change
@@ -1,10 +1,9 @@
__copyright__ = "Copyright (c) 2020 Jina AI Limited. All rights reserved."
__license__ = "Apache-2.0"

from typing import Tuple
from typing import Optional

from . import BaseExecutableDriver
from ..types.document import Document

if False:
from .. import DocumentSet
Expand All @@ -13,7 +12,7 @@
class CraftDriver(BaseExecutableDriver):
"""Drivers inherited from this Driver will bind :meth:`craft` by default """

def __init__(self, executor: str = None, method: str = 'craft', *args, **kwargs):
def __init__(self, executor: Optional[str] = None, method: str = 'craft', *args, **kwargs):
super().__init__(executor, method, *args, **kwargs)

def _apply_all(self, docs: 'DocumentSet', *args, **kwargs):
Expand All @@ -26,24 +25,3 @@ def _apply_all(self, docs: 'DocumentSet', *args, **kwargs):
@staticmethod
def update(doc, ret):
doc.set_attrs(**ret)


class SegmentDriver(CraftDriver):
"""Segment document into chunks using the executor
"""

def __init__(
self,
traversal_paths: Tuple[str] = ('r',),
*args,
**kwargs
):
super().__init__(traversal_paths=traversal_paths, *args, **kwargs)

@staticmethod
def update(doc, ret):
for r in ret:
with Document(length=len(ret), **r) as c:
if not c.mime_type:
c.mime_type = doc.mime_type
doc.chunks.append(c)
39 changes: 39 additions & 0 deletions jina/drivers/segment.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,39 @@
__copyright__ = "Copyright (c) 2020 Jina AI Limited. All rights reserved."
__license__ = "Apache-2.0"

from typing import Tuple, Optional

from . import BaseExecutableDriver
from ..types.document import Document

if False:
from .. import DocumentSet


class SegmentDriver(BaseExecutableDriver):
"""Drivers inherited from this Driver will bind :meth:`segment` by default """

def __init__(
self,
executor: Optional[str] = None,
method: str = 'segment',
traversal_paths: Tuple[str] = ('r',),
*args,
**kwargs
):
super().__init__(executor, method, traversal_paths=traversal_paths, *args, **kwargs)

def _apply_all(self, docs: 'DocumentSet', *args, **kwargs):
for doc in docs:
_args_dict = doc.get_attrs(*self.exec.required_keys)
ret = self.exec_fn(**_args_dict)
if ret:
self.update(doc, ret)

@staticmethod
def update(doc, ret):
for r in ret:
with Document(length=len(ret), **r) as c:
if not c.mime_type:
c.mime_type = doc.mime_type
doc.chunks.append(c)
2 changes: 1 addition & 1 deletion jina/executors/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -112,7 +112,7 @@ def __init__(awesomeness = 5):

"""
store_args_kwargs = False #: set this to ``True`` to save ``args`` (in a list) and ``kwargs`` (in a map) in YAML config
exec_methods = ['encode', 'add', 'query', 'craft', 'score', 'evaluate', 'predict', 'query_by_id', 'delete', 'update']
exec_methods = ['encode', 'add', 'query', 'craft', 'segment', 'score', 'evaluate', 'predict', 'query_by_id', 'delete', 'update']

def __init__(self, *args, **kwargs):
if isinstance(args, tuple) and len(args) > 0:
Expand Down
17 changes: 1 addition & 16 deletions jina/executors/crafters/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
__license__ = "Apache-2.0"

import inspect
from typing import Dict, List
from typing import Dict

from .. import BaseExecutor
from ...helper import typename
Expand All @@ -28,18 +28,3 @@ def craft(self, *args, **kwargs) -> Dict:
in the protobuf.
"""
raise NotImplementedError


class BaseSegmenter(BaseCrafter):
""":class:`BaseSegmenter` works on doc-level,
it receives value on the doc-level and returns new value on the chunk-level """

def craft(self, *args, **kwargs) -> List[Dict]:
"""The apply function of this executor.
Unlike :class:`BaseCrafter`, the :func:`craft` here works on doc-level info and the output is defined on
chunk-level. Therefore the name of the arguments should be always valid keys defined
in the doc-level protobuf whereas the output dict keys should always be valid keys defined in the chunk-level
protobuf.
:return: a list of chunks-level info represented by a dict
"""
raise NotImplementedError
26 changes: 26 additions & 0 deletions jina/executors/segmenters/__init__.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,26 @@
import inspect
from typing import Dict, List

from .. import BaseExecutor
from ...helper import typename


class BaseSegmenter(BaseExecutor):
""":class:`BaseSegmenter` works on doc-level,
it chunks Documents into set of Chunks """

def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
self.required_keys = {k for k in inspect.getfullargspec(self.segment).args if k != 'self'}
if not self.required_keys:
self.logger.warning(f'{typename(self)} works on keys, but no keys are specified')

def segment(self, *args, **kwargs) -> List[Dict]:
"""The apply function of this executor.
Unlike :class:`BaseCrafter`, the :func:`craft` here works on doc-level info and the output is defined on
chunk-level. Therefore the name of the arguments should be always valid keys defined
in the doc-level protobuf whereas the output dict keys should always be valid keys defined in the chunk-level
protobuf.
:return: a list of chunks-level info represented by a dict
"""
raise NotImplementedError
4 changes: 2 additions & 2 deletions tests/integration/issues/github_1546/bad1/custom_crafter.py
Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
from jina.executors.crafters import BaseSegmenter
from jina.executors.crafters import BaseCrafter
from .helper import helper_function


class CustomCrafter1(BaseSegmenter):
class CustomCrafter1(BaseCrafter):
def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
print(helper_function)
4 changes: 2 additions & 2 deletions tests/integration/issues/github_1546/bad2/__init__.py
Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
from .helper import helper_function

from jina.executors.crafters import BaseSegmenter
from jina.executors.crafters import BaseCrafter


class CustomCrafter2(BaseSegmenter):
class CustomCrafter2(BaseCrafter):
def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
print(helper_function)
4 changes: 2 additions & 2 deletions tests/integration/issues/github_1546/good1/custom_crafter.py
Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
from jinahub.helper import helper_function

from jina.executors.crafters import BaseSegmenter
from jina.executors.crafters import BaseCrafter


class CustomCrafter3(BaseSegmenter):
class CustomCrafter3(BaseCrafter):
def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
print(helper_function)
4 changes: 2 additions & 2 deletions tests/integration/issues/github_1546/good2/__init__.py
Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
from .helper import helper_function

from jina.executors.crafters import BaseSegmenter
from jina.executors.crafters import BaseCrafter


class CustomCrafter4(BaseSegmenter):
class CustomCrafter4(BaseCrafter):
def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
print(helper_function)
4 changes: 2 additions & 2 deletions tests/integration/issues/github_1546/good3/__init__.py
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
from typing import Tuple, Dict, List, Union

import numpy as np
from jina.executors.crafters import BaseSegmenter
from jina.executors.segmenters import BaseSegmenter

from .helper import _crop_image, _move_channel_axis, _load_image

Expand All @@ -25,7 +25,7 @@ def __init__(self,
self.target_size = target_size
self.channel_axis = channel_axis

def craft(self, blob: 'np.ndarray', *args, **kwargs) -> List[Dict]:
def segment(self, blob: 'np.ndarray', *args, **kwargs) -> List[Dict]:
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i dont see the need of changing github_1546 test case, but changing also does no harm

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it was failing the test, I think is because Segmenter does not have craft anymore as method

"""
Crop the input image array.

Expand Down
37 changes: 37 additions & 0 deletions tests/integration/level_depth/yaml/custom_executor.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,37 @@
import re
import string
from typing import Dict, List

from jina.executors.segmenters import BaseSegmenter


class DummySentencizer(BaseSegmenter):

def __init__(self,
*args, **kwargs):
super().__init__(*args, **kwargs)

punct_chars = [',']
self._slit_pat = re.compile('\s*([^{0}]+)(?<!\s)[{0}]*'.format(''.join(set(punct_chars))))

def segment(self, text: str, *args, **kwargs) -> List[Dict]:
"""
Split the text into sentences.

:param text: the raw text
:return: a list of chunk dicts with the cropped images
"""
results = []
ret = [(m.group(0), m.start(), m.end()) for m in
re.finditer(self._slit_pat, text)]
if not ret:
ret = [(text, 0, len(text))]
for ci, (r, s, e) in enumerate(ret):
f = ''.join(filter(lambda x: x in string.printable, r))
f = re.sub('\n+', ' ', f).strip()
f = f[:100]
if len(f) > 3:
results.append(dict(
text=f
))
return results
4 changes: 3 additions & 1 deletion tests/integration/level_depth/yaml/segmenter.yml
< BEA9 td id="diff-0937f550c22a17b86e08075158570f1df7e7c0b997f6e2561e7dad073bda32b6R1" data-line-number="1" class="blob-num blob-num-addition js-linkable-line-number js-blob-rnum">
Original file line number Diff line number Diff line change
@@ -1,10 +1,12 @@
!Sentencizer
!DummySentencizer
with:
min_sent_len: 3
max_sent_len: 128
punct_chars: '.,;!?:'
metas:
name: sentencizer
py_modules:
- custom_executor.py
requests:
on:
[SearchRequest, IndexRequest]:
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -6,4 +6,4 @@ requests:
[SearchRequest, TrainRequest, IndexRequest]:
- !SegmentDriver
with:
method: craft
method: segment
Original file line number Diff line number Diff line change
Expand Up @@ -6,4 +6,4 @@ requests:
[SearchRequest, TrainRequest, IndexRequest]:
- !SegmentDriver
with:
method: craft
method: segment
8 changes: 4 additions & 4 deletions tests/integration/mime/test_segmenter.py
Original file line number Diff line number Diff line change
Expand Up @@ -2,15 +2,15 @@

import pytest

from jina.executors.crafters import BaseSegmenter
from jina.executors.segmenters import BaseSegmenter
from jina.flow import Flow
from tests import random_docs

cur_dir = os.path.dirname(os.path.abspath(__file__))


class DummySegment(BaseSegmenter):
def craft(self):
def segment(self):
return [dict(buffer=b'aa'), dict(buffer=b'bb')]


Expand All @@ -36,7 +36,7 @@ def test_dummy_seg(mocker, restful):
@pytest.mark.parametrize('restful', [False, True])
def test_dummy_seg_random(mocker, restful):
mock = mocker.Mock()
f = Flow(restful=restful).add(uses=os.path.join(cur_dir, '../../unit/yaml/dummy-seg-random.yml'))
f = Flow(restful=restful).add(uses=os.path.join(cur_dir, 'dummy-seg-random.yml'))
with f:
f.index(input_fn=random_docs(10, chunks_per_doc=0), on_done=validate_factory(mock))
mock.assert_called_once()
Expand All @@ -45,7 +45,7 @@ def test_dummy_seg_random(mocker, restful):
@pytest.mark.parametrize('restful', [False, True])
def test_dummy_seg_not_random(mocker, restful):
mock = mocker.Mock()
f = Flow(restful=restful).add(uses=os.path.join(cur_dir, '../../unit/yaml/dummy-seg-not-random.yml'))
f = Flow(restful=restful).add(uses=os.path.join(cur_dir, 'dummy-seg-not-random.yml'))
with f:
f.index(input_fn=random_docs(10, chunks_per_doc=0), on_done=validate_factory(mock))
mock.assert_called_once()
6 changes: 3 additions & 3 deletions tests/unit/drivers/querylang/test_querylang_drivers.py
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
from google.protobuf import json_format

from jina.executors.crafters import BaseSegmenter
from jina.executors.segmenters import BaseSegmenter
from jina.flow import Flow
from jina.proto import jina_pb2

Expand Down Expand Up @@ -45,13 +45,13 @@ def random_docs_with_tags():

class DummySegmenter(BaseSegmenter):

def craft(self, text, *args, **kwargs):
def segment(self, text, *args, **kwargs):
return [{'text': 'adasd' * (j + 1), 'tags': {'id': j}} for j in range(10)]


class DummyModeIdSegmenter(BaseSegmenter):

def craft(self, text, *args, **kwargs):
def segment(self, text, *args, **kwargs):
if 'chunk3' not in text:
return [{'text': f'chunk{j + 1}', 'modality': f'mode{j + 1}'} for j in range(2)]
elif 'chunk3' in text:
Expand Down
8 changes: 4 additions & 4 deletions tests/unit/drivers/test_reduce_all_driver.py
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@
import pytest

from jina import Document
from jina.executors.crafters import BaseSegmenter
from jina.executors.segmenters import BaseSegmenter
from jina.executors.encoders import BaseEncoder
from jina.flow import Flow

Expand All @@ -24,7 +24,7 @@ def docs():

class MockSegmenterReduce(BaseSegmenter):

def craft(self, text: str, *args, **kwargs) -> List[Dict]:
def segment(self, text: str, *args, **kwargs) -> List[Dict]:
split = text.split(',')
chunks = [dict(text=split[0], offset=0, weight=1.0, modality='mode1'),
dict(text=split[1], offset=1, weight=1.0, modality='mode2')]
Expand Down Expand Up @@ -57,9 +57,9 @@ def validate(req):

response_mock = mocker.Mock(wrap=validate)

flow = Flow().add(name='crafter', uses='MockSegmenterReduce'). \
flow = Flow().add(name='segmenter', uses='MockSegmenterReduce'). \
add(name='encoder1', uses=os.path.join(cur_dir, 'yaml/mockencoder-mode1.yml')). \
add(name='encoder2', uses=os.path.join(cur_dir, 'yaml/mockencoder-mode2.yml'), needs=['crafter']). \
add(name='encoder2', uses=os.path.join(cur_dir, 'yaml/mockencoder-mode2.yml'), needs=['segmenter']). \
add(name='reducer', uses='- !ReduceAllDriver | {traversal_paths: [c]}',
needs=['encoder1', 'encoder2'])

Expand Down
9 changes: 6 additions & 3 deletions tests/unit/drivers/test_segmenter_driver.py
Original file line number Diff line number Diff line change
Expand Up @@ -4,8 +4,8 @@
import pytest

from jina import Document
from jina.drivers.craft import SegmentDriver
from jina.executors.crafters import BaseSegmenter
from jina.drivers.segment import SegmentDriver
from jina.executors.segmenters import BaseSegmenter
from jina.types.sets import DocumentSet


Expand All @@ -14,7 +14,7 @@ def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
self.required_keys = {'text'}

def craft(self, text: str, *args, **kwargs) -> List[Dict]:
def segment(self, text: str, *args, **kwargs) -> List[Dict]:
if text == 'valid':
# length, parent_id and id are protected keys that won't affect the segments
return [{'blob': np.array([0.0, 0.0, 0.0]), 'weight': 0.0, 'mime_type': 'text/plain', 'tags': {'id': 3}},
Expand All @@ -26,6 +26,9 @@ def craft(self, text: str, *args, **kwargs) -> List[Dict]:

class SimpleSegmentDriver(SegmentDriver):

def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)

@property
def exec_fn(self):
return self._exec_fn
Expand Down
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