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Python 1,943 224 Updated May 29, 2025

A concise list for mcp servers

677 44 Updated Mar 30, 2025
Jupyter Notebook 22 4 Updated May 22, 2025

Official repo of the modular BioExcel version of HADDOCK

Python 162 46 Updated Jun 6, 2025

A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.

Python 11 1 Updated Jun 7, 2025

A Multi-modal System for Automated Mining of Protein-Ligand Bioactivity Data from Literature

Python 44 2 Updated May 15, 2025

A collection of MCP clients.

3,584 240 Updated Jun 6, 2025

A command-line interface and Python library for generating AlphaFold3 input files.

Python 32 8 Updated Jun 4, 2025

Learning the language of protein-protein interactions

Python 72 6 Updated May 30, 2025

List of papers about Proteins Design using Deep Learning

1,685 196 Updated Jun 7, 2025

Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3

Python 57 7 Updated Apr 6, 2025

Buzz transcribes and translates audio offline on your personal computer. Powered by OpenAI's Whisper.

Python 14,592 1,079 Updated Jun 2, 2025

bakerlab pymol scripts

Python 23 3 Updated Feb 6, 2020

Toolkit for alphafold3 input and output files

Python 75 9 Updated Apr 22, 2025

Colab Notebooks covering deep learning tools for biomolecular structure prediction and design

Jupyter Notebook 391 58 Updated Apr 3, 2025

为GPT/GLM等LLM大语言模型提供实用化交互接口,特别优化论文阅读/润色/写作体验,模块化设计,支持自定义快捷按钮&函数插件,支持Python和C++等项目剖析&自译解功能,PDF/LaTex论文翻译&总结功能,支持并行问询多种LLM模型,支持chatglm3等本地模型。接入通义千问, deepseekcoder, 讯飞星火, 文心一言, llama2, rwkv, claude2, m…

Python 68,688 8,353 Updated Jun 3, 2025

Helper for managing arXiv papers in Zotero

TypeScript 207 4 Updated May 26, 2025

A high-quality tool for convert PDF to Markdown and JSON.一站式开源高质量数据提取工具,将PDF转换成Markdown和JSON格式。

Python 34,680 2,801 Updated Jun 6, 2025

RNAseq analysis notes from Ming Tang

Python 1,012 312 Updated Nov 15, 2021

清华主题PPT模板

1,318 91 Updated Mar 17, 2025

Free ChatGPT&DeepSeek API Key,免费ChatGPT&DeepSeek API。免费接入DeepSeek API和GPT4 API,支持 gpt | deepseek | claude | gemini | grok 等排名靠前的常用大模型。

Python 30,177 2,178 Updated May 17, 2025
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