Tags: jestenzel/CTSM
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The effects of ventilation (exchange of building air with canopy air)… … are accounted for in the energy budget inside the building. The effects on urban canopy air are not. This remedies that. This fixes an issue with how coefficients are applied to individual fire components. Allow units to be in molecules/m2/sec as well as kg/m2/sec. SSP3-7.0 Nitrogen-deposition file update. Fix SSP2-4.5 Nitrogen-deposition file. Turn irrigation off by default except for future scenarios. Add new external ccs_config_cesm which has the CESM cime configuration files.
Update externals for cism and cime to cesm2.1.4-rc-10. cime update wa… …s needed to run on izumi. iAdds a compset for the smyle L83 model (both 1850 and transient). BWsc1850smyle (jedwards4b) Add SSP3-7.0 extension compset and use-case, that runs for fixed 2100 conditions with 2100 landuse and 2100 harvest and fertilizer. Update Nitrogen-deposition datasets with files created from WACCM simulations for SSP scenarios (SSP3-7.0, SSP5-3.4, and SSP5-8.5). Fix several issues.
Introducing new option to solve below ground decomposition: MIMICSWi… …eder2015. The old option (CENTURYKoven2013) remains available. User will select one or the other via the namelist variable soil_decomp_method. Elin's MIMICS+ github issue relates: ESCOMP#1260. MIMICS spinup issues relate and are listed in caveats for users.
Some fixes for Gregorian calendar A few bug fixes for running with a Gregorian calendar. These primarily fix the AnnualFluxDribbler, preventing balance errors in transient runs (or in runs starting from restart files that came from transient runs). But these general fixes end up fixing a few other minor issues with Gregorian calendar runs as well.
toolchain part 1: ./gen_mksurf_namelist to create namelist/control file
This tag uncomments the fates_levleaf dimension which was added in PR E… …SCOMP#1540 and rolled into PR ESCOMP#1542, but commented out to avoid junk DIFFs during integration of PR ESCOMP#1542. This variable is necessary to accomodate FATES PR ESCOMP#752, which allows for an exponential spacing to bin widths in the VAI (LAI+SAI) calculations. This latest fates tag also includes a fix to the fates satellite phenology mode exact restart issue.
Update externals, remove need for LND_DOMAIN_FILE, etc.
(1) Update cime and cdeps externals
(2) Remove the need for LND_DOMAIN_FILE and LND_DOMAIN_PATH XML
variables in NUOPC / LILAC cases
(3) Update doc builder to fix issue with git lfs pull command
(4) Fix mksurfdata unit tests
Resolves ESCOMP#1575 (Build problem for mksurfdata tools testers)
Update to ctsm5.1.dev053 Baselines done on cheyenne ctsm5.1.dev053.cn-matrix_n08
Implement dynamic (transient) urban capability This implements the capability to run transient simulations with changes in urban density types. However, see Caveats for users section below. If transient urban is activated (do_transient_urban=.true.) and an appropriate landuse dataset is provided, the model will read in yearly PCT_URBAN for three density types from the landuse dataset and adjust other landunits accordingly. Water and energy are conserved for these transitions. Urban landunits do not account for carbon and nitrogen, however, see the dynamic urban design document (doc/design/dynamic_urban.rst) for a discussion of this.
Adding fsurdat_modifier tool fsurdat_modifier is a tool that modifies fsurdat files. It reads a surface dataset (fsurdat file) and outputs a modified copy of the same file. Current applications are limited to the simplest CTSM(SP) mode, so bgc, fire, urban, vic, lake, transient, and crop-related variables in the fsurdat file remain unchanged. It differs from modify_singlept_site_neon.py in that the latter specifically modifies soil properties of single-point surface datasets. Some functions could/should become shared for use by fsurdat_modifier. It also differs from the subset_data tool in that the latter subsets fsurdat files to regional or single-point domains. Though subset_data includes some "modify" functionality when subsetting to single-point, we intend for similar functionality to be more extensive and more object oriented in fsurdat_modifier. Again, some functions could/should become shared among these tools.
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