8000 jessieren (Jessie Jie Ren) · GitHub
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  1. VirFinder VirFinder Public

    VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data

    R 137 23

  2. VirHostMatcher VirHostMatcher Public

    VirHostMatcher: matching hosts of viruses based on oligonucleotide frequency (ONF) comparison

    HTML 30 5

  3. alignment-free alignment-free Public

    basic tools for computing alignment-free sequence comparison measures

    C++ 4

  4. kundajelab/deeplift kundajelab/deeplift Public

    Public facing deeplift repo

    Python 856 169

  5. AbateLab/SiC-seq AbateLab/SiC-seq Public

    Scripts used in the 2017 SiC-seq paper

    Python 3 3

  6. DeepVirFinder DeepVirFinder Public

    Identifying viruses from metagenomic data by deep learning

    Python 136 31

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