jvalue · TungstnBallon · Jun 30, 2024 · Jun 28, 2024 · Jun 28, 2024 · Jun 28, 2024
diff --git a/libs/language-server/src/stdlib/domain/material-science/DoiStandardizer.jv b/libs/language-server/src/stdlib/domain/material-science/DoiStandardizer.jv
@@ -0,0 +1,98 @@
+// SPDX-FileCopyrightText: 2024 Friedrich-Alexander-Universitat Erlangen-Nurnberg
+//
+// SPDX-License-Identifier: AGPL-3.0-only
+
+/** Transformer to standardize DOI references and remove dx.doi.org/ */
+publish transform RemoveDxDotDoiDotOrg {
+	from valueWithDxDotDoiDotOrg oftype text;
+	to valueWithoutDxDotDoiDotOrg oftype text;
+
+	valueWithoutDxDotDoiDotOrg: valueWithDxDotDoiDotOrg replace /\b(dx\.doi\.org\/)\b/ with "";
+}
+
+/** Transformer to standardize DOI references and remove http://dx.doi.org/ */
+publish transform RemoveHttpDxDotDoiDotOrg {
+	from valueWithHttpDxDotDoiDotOrg oftype text;
+	to valueWithoutHttpDxDotDoiDotOrg oftype text;
+
+	valueWithoutHttpDxDotDoiDotOrg: valueWithHttpDxDotDoiDotOrg replace /^http:\/\/dx\.doi\.org\/\b/ with "";
+}
+
+/** Transformer to standardize DOI references and remove http:// */
+publish transform RemoveHttp {
+	from valueWithHttp oftype text;
+	to valueWithoutHttp oftype text;
+
+	valueWithoutHttp: valueWithHttp replace /(\bhttp:\/\/)/ with "";
+}
+
+/** Transformer to standardize DOI references and remove https://doi.org/ */
+publish transform RemoveHttpsDoiDotOrg {
+	from valueWithHttpsDoiDotOrg oftype text;
+	to valueWithoutHttpsDotDoiDotOrg oftype text;
+
+	valueWithoutHttpsDotDoiDotOrg: valueWithHttpsDoiDotOrg replace /^https:\/\/doi\.org\/\b/ with "";
+}
+
+/**
+* A DOIStandardizer removes common prefixes to [doi references](https://www.doi.org/the-identifier/what-is-a-doi/).
+*
+* properties:
+* 	doiColumn: The name of the column with the doi references. This column will be overwritten!
+*
+* This block standardizes doi values by removing the following prefixes.
+* 	1. dx.doi.org/
+* 	2. http://dx.doi.org/
+* 	3. http://
+* 	4. https://doi.org/
+*
+* Examples:
+* 	- "https://doi.org/10.1111/example.1234" becomes "10.1111/example.1234"
+* 	- "dx.doi.org/10.0000/456" becomes "10.0000/456"
+* 	- "http://10.1015/23" becomes "10.1015/23"
+*/
+publish composite blocktype DOIStandardizer {
+	input UnstandardizedDOI oftype Table;
+	output StandardizedDOI oftype Table;
+
+	property doiColumn oftype text;
+
+	UnstandardizedDOI
+		-> DOIStandardizerDxDotDoiDotOrg
+		-> DOIStandardizerHttpDxDotDoiDotOrg
+		-> DOIStandardizerHttp
+		-> DOIStandardizerHttpsDoiDotOrg
+		-> StandardizedDOI;
+
+	block DOIStandardizerDxDotDoiDotOrg oftype TableTransformer {
+		inputColumns: [
+			doiColumn
+		];
+		outputColumn: doiColumn;
+		uses: RemoveDxDotDoiDotOrg;
+	}
+
+	block DOIStandardizerHttpDxDotDoiDotOrg oftype TableTransformer {
+		inputColumns: [
+			doiColumn
+		];
+		outputColumn: doiColumn;
+		uses: RemoveHttpDxDotDoiDotOrg;
+	}
+
+	block DOIStandardizerHttp oftype TableTransformer {
+		inputColumns: [
+			doiColumn
+		];
+		outputColumn: doiColumn;
+		uses: RemoveHttp;
+	}
+
+	block DOIStandardizerHttpsDoiDotOrg oftype TableTransformer {
+		inputColumns: [
+			doiColumn
+		];
+		outputColumn: doiColumn;
+		uses: RemoveHttpsDoiDotOrg;
+	}
+}
diff --git a/libs/language-server/src/stdlib/domain/material-science/MaterialScienceValueTypes.jv b/libs/language-server/src/stdlib/domain/material-science/MaterialScienceValueTypes.jv
@@ -0,0 +1,55 @@
+// SPDX-FileCopyrightText: 2024 Friedrich-Alexander-Universitat Erlangen-Nurnberg
+//
+// SPDX-License-Identifier: AGPL-3.0-only
+
+constraint DOIFormat on text: value matches /\b10\.\d{4}\/[^\s]+\b/;
+/**
+* DOI Format has been constrained by a standard pattern, eg: 10.1007/xxxx
+* The `DOIStandardizer` block can remove common prefixes to this pattern, with the result matching this format.
+*/
+publish valuetype DOI oftype text {
+	constraints: [
+		DOIFormat
+	];
+}
+
+constraint DateFormatYYYYMMDDRegex on text: value matches /\d{4}-\d{2}-\d{2}/;
+/** DateFormat as YYYY-MM-DD */
+publish valuetype DateYYYYMMDD oftype text {
+	constraints: [
+		DateFormatYYYYMMDDRegex
+	];
+}
+
+constraint SiUnitConstraint on text: value matches /\b((Second|Metre|Kilogram|Ampere|Kelvin|Mole|Candela)+\^\(\d+(\.\d+)?\|\-\d+(\.\d+)?\)+\s)*\b/;
+/** Constraining the Unit column to be of a specific format like "Second^(1.0)", "Ampere^(1.0)" or "Candela^(1.0)". */
+publish valuetype SiUnit oftype text {
+	constraints: [
+		SiUnitConstraint
+	];
+}
+
+constraint PressureUnitPascalConstraint on text: value matches /\b(Pascal\^\(\d+(\.\d+)?\|\-\d+(\.\d+)?\)+\s)*\b/;
+/** Constrains Pressure units to be Pascal^(x). */
+publish valuetype PressureUnitPascal oftype text {
+	constraints: [
+		PressureUnitPascalConstraint
+	];
+}
+
+constraint LengthUnitMeterConstraint on text: value matches /\b(Meter\^\(\d+(\.\d+)?\|\-\d+(\.\d+)?\)+\s)*\b/;
+/** Constrains Length units to be Meter^(x). */
+publish valuetype LengthUnitMeter oftype text {
+	constraints: [
+		LengthUnitMeterConstraint
+	];
+}
+
+
+constraint TemperatureUnitKelvinConstraint on text: value matches /\b(Kelvin\^\(\d+(\.\d+)?\|\-\d+(\.\d+)?\)+\s)*\b/;
+/** Constrains Temperature units to be Kelvin^(x). */
+publish valuetype TemperatureUnitKelvin oftype text {
+	constraints: [
+		TemperatureUnitKelvinConstraint
+	];
+}