Stars
Code for the MLPP method described in: "Co-evolution based machine-learning for predicting functional interactions between human genes" Stupp et al.
🧑🏫 60+ Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), ga…
Python SDK, Proxy Server (LLM Gateway) to call 100+ LLM APIs in OpenAI format - [Bedrock, Azure, OpenAI, VertexAI, Cohere, Anthropic, Sagemaker, HuggingFace, Replicate, Groq]
🚀 智谱清言ChatGLM-4-Plus大模型逆向API【特长：超强智能体】，支持高速流式输出、支持智能体对话、支持多轮对话、支持沉思模型、支持Zero思考推理模型、支持视频生成、支持AI绘图、支持联网搜索、支持长文档解读、支持代码调用、支持图像解析，零配置部署，多路token支持，自动清理会话痕迹，仅供测试，如需商用请前往官方开放平台。
Dify is an open-source LLM app development platform. Dify's intuitive interface combines AI workflow, RAG pipeline, agent capabilities, model management, observability features and more, letting yo…
A pipeline for the identification of fungi in public metagenomics datasets
Caizzi, Monteiro-Martins (2021)
Data and the co-authored network I extracted for lab selection in 3D genome research field
Codes used for all the data analysis steps in the paper "Single-cell transcriptomics identifies an effectorness gradient shaping the response of CD4+ T cells to cytokines"
ReplexChIPQC is a pair of R scripts and an R markdown replicating and extending the functionality of the R package ChIPQC. Featuring highly customizable reports for any size experiment, elimination…
hjanime / XPRESSpipe
Forked from XPRESSyourself/XPRESSpipeAn alignment and analysis pipeline for Ribosome Profiling and RNA-seq data
analysis for the paper "high-throughput analysis of lncRNA core promoters elucidates rules governing tissue specificity"
Bioinformatic tools (R scripts) for the analysis of Absolute Quantification of Architecture (AQuA-HiChIP) style data.
🌈Beamer风格的幻灯片模板集。包含了PowerPoint和Keynote两套格式。
CodeHub is an iOS application written using Xamarin
Multi-threaded C++ parser to convert registered ChIP-SEQ peak IDs (HOMER) to table of average peak intensities
Collections of library structure and sequence of popular single cell genomic methods