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@haniffalab

Haniffa Lab

We apply disruptive techniques to understand how the immune system develops and maintains health

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  1. webatlas-pipeline webatlas-pipeline Public

    A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas

    Python 62 10

  2. FCA_liver FCA_liver Public

    All software used for “Decoding human fetal liver haematopoiesis” (Popescu, Botting, Stephenson et al., 2019).

    R 39 16

  3. scRNA-seq_analysis scRNA-seq_analysis Public

    Single cell RNA-seq analysis bundle

    R 34 10

  4. HCA_skin HCA_skin Public

    HCA data analysis

    Jupyter Notebook 18 3

  5. webatlas-app webatlas-app Public

    An application to display spatial and single-cell experiment data. Built in React, on the Vitessce framework.

    JavaScript 14 3

  6. FCA_bone_marrow FCA_bone_marrow Public

    This repository contains all analysis scripts used to explore single cell datasets for: Jardine and Webb et al., 2021, "Blood and immune development in human fetal bone marrow and in Down syndrome"…

    Jupyter Notebook 13 6

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