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gozsari/README.md

๐Ÿ‘‹ Hello, I'm Gรถkhan ร–zsari

๐Ÿš€ Data Engineer @ SciLifeLab Data Centre | ๐Ÿ‘จโ€๐Ÿ”ฌ Research Engineer @ Chalmers University of Technology
๐ŸŽ“ PhD Candidate in Computer Science, METU | ๐Ÿ’ก Passionate about Data Science, AI, and Open Science


๐Ÿง  About Me

Iโ€™m a Research Engineer and Data Engineer with an academic background and over 10 years of experience across academia and research infrastructure. I currently contribute to large-scale life science data projects at Chalmers e-Commons and SciLifeLab DC.

My personal interests include:

  • Machine Learning & Deep Learning (especially for bioinformatics)
    • Graph Neural Networks
    • Explainability
    • Transfer Learning
  • MLOps and scalable data pipelines
  • Open Science and FAIR data principles
  • Research tooling and infrastructure
  • Education and training in data science and machine learning

โš™๏ธ Skills & Technologies

Category Tools & Technologies
Programming Languages
Version Control and CI/CD
Data Science & ML/DL
Explainability Tools
MLOps & Experiment Tracking
Web & API Development
Containers & Automation
Databases
Performance Testing
Active Learning Framework
Identity & Access Management

๐Ÿ“‚ Featured Repositories

๐Ÿ“š Tutorials

Here are some of my tutorials prepared to help you get started with various tools and technologies.


๐Ÿ“ˆ GitHub Stats

Gรถkhan ร–zsari's GitHub stats Top Langs


๐Ÿ“ซ Let's Connect


Thanks for stopping by! Feel free to explore my repos or reach out for collaboration.

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  1. SLPred SLPred Public

    a tool for subcellular localization prediction of human proteins

    Python 3

  2. Awesome-GNN-based-drug-discovery Awesome-GNN-based-drug-discovery Public

    This is a curated list of research papers, resources and tools related to using Graph Neural Networks (GNNs) for drug discovery.

    48 9

  3. ProtFeat ProtFeat Public

    ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.

    Python 20 3

  4. Single-Cell-Data-Analysis Single-Cell-Data-Analysis Public

    Notes and studies about single-cell RNA-Seq analysis

    Python 8 4

  5. SPMap_Tool SPMap_Tool Public

    This repo is to extract protein features using SPMap tool

    Python 2

  6. ML-OneDay-Course ML-OneDay-Course Public

    This is a one-day machine learning introductory course for beginners

    Jupyter Notebook 5

0