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tutorials-pointcloud-python Public
Forked from jlgregorio/tutorials-pointcloud-pythonTutorials for pointcloud processing in Python (basic operations, spatial indexing, registration, segmentation & primitive fitting)
Jupyter Notebook UpdatedJun 20, 2025 -
animated_matplotlib-binder Public
Notebook to demonstrate animated plots with Matplotlib in JupyterLab and Jupyter Notebook 7+ served via MBinder system.
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Demonstrate analysis of Logan Search results in a MyBinder-served session.
Jupyter Notebook MIT License UpdatedMay 30, 2025 -
bear-classifier Public
Forked from Allen-BME/bear-classifier -
fqgrep-binder Public
Demonstrating Fulcrum Genomics' fqgrep in MyBinder-served sessions
Jupyter Notebook MIT License UpdatedMay 23, 2025 -
indraniel_fqgrep-binder Public
Forked from indraniel/fqgrepindraniel/fqgrep (An approximate sequence pattern matcher for FASTQ/FASTA files) working via MyBinder-served Jupyter sessions.
C ISC License UpdatedMay 2, 2025 -
humap3-binder Public
Using data from hu.MAP 3.0 with the convenience of Python and Jupyter.
Jupyter Notebook MIT License UpdatedApr 21, 2025 -
humap2-binder Public
Using data from hu.MAP 2.0 with the convenience of Python and Jupyter.
Jupyter Notebook MIT License UpdatedApr 21, 2025 -
cl_sq_demo-binder Public
A collection of demonstrations of useful resources for command line / Jupyter session manipulation of sequence files.
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sequencework Public
programs and scripts, mainly python, for analyses related to nucleic or protein sequences
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test_nco Public
test copying notebooks-collection-opendata repo to unrelated to see if will build at all
UpdatedMar 24, 2025 -
test_mar_24_2025 Public
test mybinder build March 24 2025
Ju 10000 pyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedMar 24, 2025 -
A game theoretic approach to explain the output of any machine learning model.
Jupyter Notebook MIT License UpdatedMar 19, 2025 -
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general_scripted_plotting Public
Scripts that make plots of generalized data.
Jupyter Notebook MIT License UpdatedMar 16, 2025 -
PDBmodelComparator Public
Tool to generate overviews between models of related macromolecular structures available in the Protein Data Bank.
Python MIT License UpdatedMar 3, 2025 -
structurework Public
programs and scripts for molecular structure analysis
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communication_voila Public
Forked from nomcomm/communication_voilaa number of demonstrations of plots and ipywidgets widgets in notebooks and Voila
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voilasample-repo Public
seeing if template works
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedJan 6, 2025 -
ipympl Public
Forked from matplotlib/ipymplMatplotlib Jupyter Integration
TypeScript BSD 3-Clause "New" or "Revised" License UpdatedJan 6, 2025 -
voici-demotestMay24 Public
Demo of Voici (Voila/JupyterLite) based on the demo repo as it existed in May 2024
Jupyter Notebook UpdatedJan 6, 2025 -
SQUARNA-binder Public
Forked from febos/SQUARNARNA secondary structure prediction tool (fork to try via MyBinder-served Jupyter sessions)
Jupyter Notebook Apache License 2.0 UpdatedDec 20, 2024 -
genomenotebook-binder Public
Forked from dbikard/genomenotebookA genome browser in your Jupyter notebook (fork to try via MyBinder-served Jupyter sessions)
Jupyter Notebook Apache License 2.0 UpdatedDec 16, 2024 -
back_to_ipynb Public
Conversion of the HTML representation of Jupyter notebook back to an `.ipynb` file
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cluster_analysis-binder Public
Demonstrating various clustering algorithms in Python, all provided actively useable via MyBinder.org.
Jupyter Notebook MIT License UpdatedDec 11, 2024 -
3Dscatter_plot-binder Public
3D scatter plot examples via Binder
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Notebook to demonstrate animated plots with Matplotlib in classic Jupyter notebook interface & NbClassic served via MyBinder system.
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ranked_list_comparison_demo Public
A notebook to demonstrate a function for comparing ranked lists.
Jupyter Notebook MIT License UpdatedNov 24, 2024 -
text_mining Public
general text mining and text manipulation with Python scripts
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BPL_TEST2_Batch_calibration Public
Forked from janpeter19/BPL_TEST2_Batch_calibrationMaterial for standard text book model of batch cultivation where model is calibrated using time series data for substrate and cell concentration. Updated.
Jupyter Notebook GNU General Public License v3.0 UpdatedNov 22, 2024
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