Stars
Automated upstream mirror for libbpf stand-alone build.
🧱 The software design and architecture roadmap for any developer
Hard-to-test patterns in C++ and how to refactor them
Collection of various algorithms in mathematics, machine learning, computer science and physics implemented in C++ for educational purposes.
A tool to map bisulfite converted sequence reads and determine cytosine methylation states
CTF framework and exploit development library
An ensemble approach to accurately detect somatic mutations using SomaticSeq
Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls
New generation entropy codecs : Finite State Entropy and Huff0
A collection of resources for Deep Learning in Python for Life Sciences (with focus on biotech and pharma).
TypeDB: the power of programming, in your database
FOSSology is an open source license compliance software system and toolkit. As a toolkit you can run license, copyright and export control scans from the command line. As a system, a database and w…
A free open source IT asset/license management system
A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too
BioBombe: Sequentially compressed gene expression features enhances biological signatures
High performance block-sorting data compression library
libsais is a library for linear time suffix array, longest common prefix array and burrows wheeler transform construction based on induced sorting algorithm.
zlib replacement with optimizations for "next generation" systems.
A versatile pairwise aligner for genomic and spliced nucleotide sequences
C library for high-throughput sequencing data formats
oneAPI Threading Building Blocks (oneTBB)