10000 MRG: update sourmash and snakemake dependencies by ctb · Pull Request #239 · dib-lab/charcoal · GitHub
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MRG: update sourmash and snakemake dependencies #239

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@ctb ctb commented Oct 29, 2023

Update sourmash deps to 4.8.4 and snakemake to 7.32.4.

Note: sourmash update had to deal with new LineageTuple stuff from sourmash-bio/sourmash#2437.

Fixes #237

@ctb ctb mentioned this pull request Nov 3, 2023
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Both DEMO datasets Fails with: ImportError: cannot import name 'LineagePair' from 'sourmash.lca'
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