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Encountered an Error. Message: Can't recognize paired fastq files.

#601

· ClaudiaPaetzold opened

on May 23, 2025

3D-GBS, not suitable with pair3rad, because SE data

#600

· edgagnon opened

on Apr 28, 2025

analysis.tetrad: Broken for toytree and updated Tetrad API

#599

· isaacovercast opened

on Apr 14, 2025

error in step 5

#592

· onmikula opened

on Feb 6, 2025

Error ipyrad step 3

#591

· urigarciaunam opened

on Feb 5, 2025

Files required for steps 4-7

#588

· carlahurt opened

on Jan 9, 2025

analysis.bpp - Toytree 3 compatibility

#586

· isaacovercast opened

on Dec 9, 2024

No progress in struct.run

#584

· Zombiekotze opened

on Nov 29, 2024

ipa.raxml should have a <code>draw</code> function

#583

· isaacovercast opened

on Nov 9, 2024

PCA cookbook is out of date

#579

· isaacovercast opened

on Sep 22, 2024

PCA plotting is broken w/ numpy > 2.0

#578

· isaacovercast opened

on Sep 21, 2024

Step 2 why is it trimming R1/R2 ?

#576

· isaacovercast opened

on Sep 12, 2024

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