8000 Release November release update · deeptools/HiCMatrix · GitHub
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November release update

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@joachimwolff joachimwolff released this 13 Nov 17:52
· 149 commits to master since this release
31472c5
  • Fixing how cooler data is load, dtype is now read dynamically

  • Changing way how cooler file is written:

    • Less memory for cooler to cooler files, nan_factors are not applied anymore
    • Fixed a bug writing wrong values to cooler file
  • Adding test cases:

    • h5 to cool
    • cool to cool
    • option check for enforce integer
    • check for if file was h5 in cooler write
    • Make load of h5 file more stable, adding removal of zero values and set nan and inf values to 0.
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