deLaatLab

pipe4C Public
4C-seq processing pipeline

deLaatLab/pipe4C’s past year of commit activity

R 23 17 0 0 Updated Mar 17, 2025
CSND Public
Gene expression, epigenetics and disease CSND course.

deLaatLab/CSND’s past year of commit activity

0 0 0 0 Updated Jan 24, 2025
Tjalsma_2025 Public
Long-range enhancer-controlled genes are hyper-sensitive to regulatory factor perturbations.

deLaatLab/Tjalsma_2025’s past year of commit activity

R 0 0 0 0 Updated Jan 24, 2025
HbF_react Public
ATAC and C&R coverage plots for "Enhancer distance matters: forced linear recruitment of a super-enhancer strongly reactivates the developmentally silenced fetal HBG globin genes"

deLaatLab/HbF_react’s past year of commit activity

R 0 0 0 0 Updated Sep 13, 2024
triplix Public
An interface and processing pipeline for multi-contact spatial genomics data

deLaatLab/triplix’s past year of commit activity

Python 0 MIT 0 0 0 Updated Nov 7, 2023
PLIER Public
Detecting chromosomal rearrangements from targeted proximity-ligation data

deLaatLab/PLIER’s past year of commit activity

Python 2 1 0 0 Updated Mar 6, 2023
PCNA-NAQ-seq Public

deLaatLab/PCNA-NAQ-seq’s past year of commit activity

R 0 0 0 0 Updated Jul 12, 2022
peakHiC Public
peakHiC method to identify 3D chromatin interactions (loops) from HiC data

deLaatLab/peakHiC’s past year of commit activity

R 5 1 2 0 Updated May 31, 2021
mc4c_py Public Forked from UMCUGenetics/pymc4c
A python based approach to processing MC4C data

deLaatLab/mc4c_py’s past year of commit activity

Python 2 2 0 0 Updated Mar 19, 2020
peakHiC_trackHub Public
peakHiC V4C bigWig tracks for import into e.g. UCSC genome browser

deLaatLab/peakHiC_trackHub’s past year of commit activity

1 0 0 0 Updated Jan 9, 2020

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