Stars
Graphical Fragment Assembly (GFA) Format Specification
Mumemto: multi-MUM and MEM finding across pangenomes
strange cross-platform, performance-oriented and interactive pangenome and large graph visualization
Explore 5,000+ genomes in the terminal. Light, blazing fast 🚀, vim-motion.
Official home of genome aligner based upon notion of Cactus graphs
Pangenome Sequence Naming: a backwards-compatible hack to simplify the identification of samples and haplotypes in pangenomes
A terminal workspace with batteries included
Conda recipes for the bioconda channel.
A collection of modern/faster/saner alternatives to common unix commands.
A beautiful, simple, clean, and responsive Jekyll theme for academics
asl / BandageNG
Forked from rrwick/Bandagea Bioinformatics Application for Navigating De novo Assembly Graphs Easily
Create a set of founder sequences from a set of multiple-aligned sequences.
Optimized Dynamic Genome/Graph Implementation: understanding pangenome graphs