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  • GitHub Actions experiments and examples

    Updated Mar 22, 2023
  • The DNAnexus incremental upload script packaged as an Ansible Role

    Python Updated Jun 23, 2022
  • VEP_plugins Public

    Forked from Ensembl/VEP_plugins

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Perl Apache License 2.0 Updated Mar 18, 2021
  • Kaggle competitions, small projects, tests

    Jupyter Notebook Updated Feb 13, 2021
  • hail Public

    Forked from hail-is/hail

    Scalable genomic data analysis.

    Scala MIT License Updated Feb 1, 2021
  • vimrc Public

    Forked from amix/vimrc

    The ultimate Vim configuration: vimrc

    Vim Script MIT License Updated Jun 21, 2020
  • wdlTools Public

    Forked from dnanexus/wdlTools

    WDL tools for parsing, type-checking, and more

    Scala Apache License 2.0 Updated Jun 10, 2020
  • A Git extension for JupyterLab

    TypeScript BSD 3-Clause "New" or "Revised" License Updated Nov 4, 2019
  • TensorFlow's Visualization Toolkit

    Python Apache License 2.0 Updated Mar 9, 2019
  • Random collection of python & bash scripts

    Python Updated Feb 28, 2019
  • JupyterLab computational environment.

    JavaScript Other Updated Feb 13, 2019
  • sashimi Public

    Python Updated Jan 5, 2019
  • Jupyter Notebook Updated Oct 11, 2018
  • Implementation of matrix decompositions in Scala

    Scala Updated Sep 21, 2018
  • NCRF Public

    Forked from baidu-research/NCRF

    Cancer metastasis detection with neural conditional random field (NCRF)

    Python Apache License 2.0 Updated Jul 23, 2018
  • Running Clairvoyante (a convolutional deep neural network variant calls) from Ruibang, etc., on DNAnexus platform

    Python MIT License Updated May 24, 2018
  • tybalt Public

    Forked from greenelab/tybalt

    Training and evaluating a variational autoencoder for pan-cancer gene expression data

    Jupyter Notebook BSD 3-Clause "New" or "Revised" License Updated May 8, 2018
  • docker Public

    Misc docker images

    Updated Jan 30, 2018
  • Repo to test automatic Dockstore, Quai.io, Github sync

    Updated Mar 2, 2017
  • Algorithm implementations, code snippets, tests

    Java Updated Jan 14, 2017
  • Solutions to 99 problems in Scala plus some scripts and tests http://aperiodic.net/phil/scala/s-99/

    Scala Updated Dec 15, 2016
  • Solutions to the online course problems

    MATLAB Updated Oct 31, 2016
  • MortgageCMP Public

    A mortgage calculator and comparator Android app.

    Java Updated Oct 31, 2016
  • My solutions to Women Who Code NYC Problems in Rust

    Java Updated Oct 31, 2016
  • Simplex Method implementation for linear optimization

    Java Updated May 20, 2016
  • Playing with scala and play framework and testing some modern portfolio theory calculations

    Scala Other Updated Jan 9, 2016
  • Data cleaning scripts for kaggle titanic compatition (mainly in python-pandas)

    Python Updated Aug 20, 2015
  • Hackaton in Darmstadt, June 7th 2014.

    Java Updated Jun 20, 2014
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