Researcher in Computational Biology at Inria, I develop tools for sequencing data analyses.
Highlights
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SV genotyper for long reads with a variation graph
DrjBreakpointFinder identifies the precise recombination breakpoints in Direct Repeat Junctions (DRJs) of viral insertions in the host genome.
MTG-Link: Local assembly tool for linked-read data
Core library of the Genome Analysis Toolbox with de-Bruijn graph