Stars
Code for the paper "Estimation of the Number of Spiked Eigenvalues in a Covariance Matrix by Bulk Eigenvalue Matching Analysis"
PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. This is a comprehensive upd…
Software for joint testing and estimation of the significance threshold in Genome-Wide association studies
Lean 4 programming language and theorem prover
web-based analysis tool for rare disease genomics
fwdpp is a C++ template library for implementing efficient forward-time population genetic simulations
An R package for creating Q-Q and manhattan plots from GWAS results
normalize, left-align, trim, validate and clean VCF files
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis