cbinstilbio
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rnaseq
rnaseq PublicForked from nf-core/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Nextflow
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hlatyping
hlatyping PublicForked from nf-core/hlatyping
Precision HLA typing from next-generation sequencing data
Nextflow
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sarek
sarek PublicForked from nf-core/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Nextflow
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CalliNGS-NF
CalliNGS-NF PublicForked from CRG-CNAG/CalliNGS-NF
GATK RNA-Seq Variant Calling in Nextflow
Nextflow
Repositories
- sarek Public Forked from nf-core/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
cbinstilbio/sarek’s past year of commit activity - rnaseq Public Forked from nf-core/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
cbinstilbio/rnaseq’s past year of commit activity - hlatyping Public Forked from nf-core/hlatyping
Precision HLA typing from next-generation sequencing data
cbinstilbio/hlatyping’s past year of commit activity
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