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24 Open 42 Closed
24 Open 42 Closed
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Issues list

Clarification on VCF Output
#69 opened May 19, 2025 by HLHsieh
1
Determine the first and last reference base included in the STR call
#68 opened Apr 15, 2025 by ljohansson
4
Expectation of no. of allele in a loci
#67 opened Apr 9, 2025 by NabilAsyraf98
4
bed file
#66 opened Apr 8, 2025 by bioinfomatio
1
--max_str_len and --max_cov are not working
#65 opened Apr 8, 2025 by xbwdk
1
Problem with partial reads
#64 opened Mar 26, 2025 by leonschuetz
5
inconsistent repeat unit for targeted locus genotyping?
#63 opened Mar 19, 2025 by h-orias
8
can't limit to specific chromosome?
#62 opened Jan 29, 2025 by h-orias
5
Missed RepeatExpansion calls
#61 opened Jan 29, 2025 by leonschuetz
17
Can straglr benchmark HG002?
#57 opened Dec 26, 2024 by HongyuanChu
3
Expanded allele not detected
#56 opened Nov 25, 2024 by stfacc
4
Problem with VCF files
#55 opened Nov 20, 2024 by stfacc
2
TypeError: 'NoneType' object is not subscriptable
#49 opened Sep 11, 2024 by jawad9-11
1
Error: malformed BED entry at line xxx. Start Coordinate detected that is < 0.
#48 opened Sep 11, 2024 by minw2828
4
--regions: a BED file containing regions to be used only in genome-scan
#47 opened Sep 8, 2024 by minw2828
1
Representing tandem repeats in VCF
#46 opened Aug 30, 2024 by dennishendriksen
2
Discrepancy allele length and sequence
#42 opened Jul 11, 2024 by ljohansson
23
IndexError: list index out of range
#41 opened Jun 13, 2024 by lfearnley
3
Symbolic alleles in VCF output
#40 opened Jun 5, 2024 by bartcharbon
14
Loci with multiple motifs at same position
#38 opened May 28, 2024 by christopher-schroeder
4
Genotyping amplicons?
#30 opened Feb 18, 2024 by adbeggs
1
Repeat Interruptions
#28 opened Nov 20, 2023 by stefandiederich
11
Problem with --trf_args
#27 opened Nov 2, 2023 by ilariastewart
1
An issue about complex STRs
#19 opened Jan 7, 2023 by fjmuzengyiheng
12
ProTip! Updated in the last three days: updated:>2025-05-24.
0