The goal of CPTrackRApp is to fix track identifiers from CellProfiler’s sqlite output. CPTrackRApp is a Shiny app that analyses the sqlite file, and determines the parameters for CPTrackR to fix the track. Additionally it shows the CellProfiler pipeline metadata, and previews the fixed tracks.

You can install the development version of CPTrackRApp from with:

# install.packages("remotes")
remotes::install_github("burgerga/CPTrackRApp")

To start the app use

CPTrackRApp::run_app()

Screenshot: