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Starred repositories

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Make websites accessible for AI agents

Python 33,224 3,391 Updated Feb 25, 2025

Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.

Python 36 10 Updated Feb 21, 2025

Annotation and Ranking of Structural Variation

Tcl 239 34 Updated Jan 16, 2025

A collection of notebooks/recipes showcasing some fun and effective ways of using Claude.

Jupyter Notebook 10,566 1,191 Updated Feb 24, 2025

Debug, evaluate, and monitor your LLM applications, RAG systems, and agentic workflows with comprehensive tracing, automated evaluations, and production-ready dashboards.

Python 5,148 342 Updated Feb 25, 2025

An LLM-powered knowledge curation system that researches a topic and generates a full-length report with citations.

Python 22,038 1,931 Updated Jan 23, 2025

A library of "Micro Agents" that make it easy to add reliable intelligence to any application.

Python 9 3 Updated Sep 21, 2024

Run your own AI cluster at home with everyday devices 📱💻 🖥️⌚

Python 25,235 1,504 Updated Feb 25, 2025

LLM101n: Let's build a Storyteller

31,971 1,735 Updated Aug 1, 2024

A massively parallel, optimal functional runtime in Rust

Cuda 10,844 419 Updated Nov 21, 2024

A massively parallel, high-level programming language

Rust 18,387 457 Updated Feb 23, 2025

Sanger quick sequencing stuff made by Merck guys

Python 1 Updated Apr 12, 2024

Introduction to bioinformatics

Jupyter Notebook 1 Updated Apr 18, 2024

Advanced school of big data / ICMC USP

Jupyter Notebook 1 Updated Apr 18, 2024

Phenotype prediction using cancer-related data

Jupyter Notebook 1 Updated Apr 18, 2024

many pipes to deal with SABE_PB data

R 1 Updated Dec 1, 2019

html

HTML 1 Updated Mar 12, 2021

Desafio lançado dia 05 de março com deadline dia 12 de março de 2021.

HTML 1 Updated Mar 12, 2021
Jupyter Notebook 1 Updated Jun 4, 2023

Merge of vcf files from simons project

Shell 1 Updated May 10, 2017

LAT array affymetrix

R 1 Updated Apr 24, 2017

Step-by-step

1 Updated Aug 4, 2015

Repository for Programming Assignment 2 for R Programming on Coursera

R 1 Updated Jun 21, 2015

Material for Evolutionary Genomics course - data analysis module

F* 1 4 Updated Nov 21, 2020

Population genetic simulations in R 🌍

R 56 6 Updated Feb 25, 2025

PM520 Advanced Statistical Computing

Jupyter Notebook 13 2 Updated Feb 21, 2025

vcfdist: Accurately benchmarking phased variant calls

C++ 79 7 Updated Feb 14, 2025

Official code repository for GATK versions 4 and up

Java 1,770 601 Updated Feb 25, 2025
Jupyter Notebook 7 1 Updated Jul 16, 2024
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