Stars
a cutting-edge cell segmentation model specifically designed for single-molecule resolved spatial omics datasets. It addresses the challenge of accurately segmenting individual cells in complex ima…
Evaluation of Multimodal Model Perceptual Abilities: A Survey
Source code for DeepCSeg plug-in for CellProfiler
Stochastic-YOLO: Efficient Probabilistic Object Detection under Dataset Shifts
This repo is a packaged version of the Yolov9 model.
CenterSAM: Fully Automatic Prompt for Dense Nucleus Segmentation
A python algorithm for tracking cells in 3D time lapse images.
A deep learning model for single cell segmentation from microsopy images.
Codebase for "A Foundation Model for Cell Segmentation"
NuLite - Lightweight and Fast Model for Nuclei Instance Segmentation and Classification
Encoder-Decoder Cell and Nuclei segmentation models
Scalable Instance Segmentation using PyTorch & PyTorch Lightning.
A deep-learning pipeline for segmentation of ambiguous microscopic images.
Deep Learning Library for Spot Detection
VMamba: Visual State Space Models，code is based on mamba
Sub-cellular spatial transcriptomics Cell Segmentation
Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data
Lightweight, open-source, high-performance Yolo implementation
A simple, fully convolutional model for real-time instance segmentation.
Unsupervised segmentation of cells and nuclei their in complex tissue samples
[CVPR 2025] Mr. DETR: Instructive Multi-Route Training for Detection Transformers