-
Research Assistant Prof., National Institute of Chemistry, Slovenia & Bakerl Lab, UW
- Ljubljana
- https://orcid.org/0000-0002-2171-1579
- @AjasjaLjubetic
- @ajasjaljubetic.bsky.social
-
prosculpt Public
Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)
-
ajasja.github.io Public
Forked from academicpages/academicpages.github.ioGithub Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
HTML MIT License UpdatedJun 19, 2025 -
LUMICKS_image_alignment Public
Scripts to align various channels based on reference beads.
-
pixi Public
Forked from prefix-dev/pixiPackage management made easy
Rust BSD 3-Clause "New" or "Revised" License UpdatedMay 23, 2025 -
ColabFold Public
Forked from sokrypton/ColabFoldMaking Protein folding accessible to all!
Jupyter Notebook MIT License UpdatedMay 19, 2025 -
PROPER Public
Single-chain permuted proteins for dimerization-based control of protein activity and cellular processes
Jupyter Notebook UpdatedMay 16, 2025 -
homooligomer_RMSD Public
Script to calculate RMSD between symmetric homo-oligmoers
-
INSRTR Public
Regulation of proteins using coiled-coils
Jupyter Notebook MIT License UpdatedMay 8, 2024 -
NGB2H Public
Code accompanying the article "A Multiplexed Bacterial Two-Hybrid for Rapid Characterization of Protein-Protein Interactions and Iterative Protein Design"
-
rosetta Public
Forked from RosettaCommons/rosettaThe Rosetta Bio-macromolecule modeling package.
C++ Other UpdatedJan 17, 2024 -
-
MP3-DUET-AUTOTUNE Public
Forked from Seeliglab/MP3-DUET-AUTOTUNEData and analysis code for MP3-Seq
Jupyter Notebook MIT License UpdatedJul 5, 2023 -
ProteinMPNN Public
Forked from dauparas/ProteinMPNNCode for the ProteinMPNN paper
Jupyter Notebook MIT License UpdatedFeb 3, 2023 -
-
CC_protein_origami Public
Forked from NIC-SBI/CC_protein_origamiDesign platform for creating single-chain polyhedral cages made from coiled-coil building modules
Jupyter Notebook UpdatedOct 12, 2022 -
-
RosettaCrashCourse Public
Materials for Rosetta Crash Course (2022)
-
Spelunking Public
Forked from szhorvat/SpelunkingRead definitions of in-memory Mathematica functions with ease
Jupyter Notebook UpdatedJun 6, 2022 -
-
PyRosetta.notebooks Public
Forked from RosettaCommons/PyRosetta.notebooksJupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
-
picasso Public
Forked from jungmannlab/picassoA collection of tools for painting super-resolution images
Python MIT License UpdatedMay 5, 2022 rosetta_pymol_utils Public
Helpful visualization in pymol for PDBs written by Rosetta
OrthoCCTools Public
Forked from dancsi/OrthoCCToolsComputational coiled-coil peptide design toolkit, written in modern C++
C++ MIT License UpdatedFeb 10, 2021 openmm Public
Forked from openmm/openmmOpenMM is a toolkit for molecular simulation using high performance GPU code.
C++ UpdatedAug 5, 2020 silent_tools Public
Forked from bcov77/silent_toolsA bunch of shell utilities for dealing the silent files
Python UpdatedApr 17, 2020 ddg Public
Forked from Kortemme-Lab/ddgA DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.
isambard-1 Public
Forked from isambard-uob/isambardIntelligent System for Analysis, Model Building And Rational Design of biomolecules.
Python MIT License UpdatedJun 27, 2018 DeNovoHeterodimers Public
Forked from uagaug/DeNovoHeterodimersScripts and data deposition for de novo heterodimers manuscript
Python UpdatedJun 7, 2018 Previous Next