8000 Update call to pl.read_csv · Issue #57 · aertslab/pycisTopic · GitHub
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Update call to pl.read_csv #57

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dburkhardt opened this issue Jan 30, 2023 · 2 comments
Closed

Update call to pl.read_csv #57

dburkhardt opened this issue Jan 30, 2023 · 2 comments

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@dburkhardt
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dburkhardt commented Jan 30, 2023 •
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pycisTopic/pycisTopic/utils.py

Line 397 in 242c2a4

has_headers=False,

This code is no longer up to date with polars. The current code has a parameter has_header not has_headers.

See https://pola-rs.github.io/polars/py-polars/html/reference/api/polars.read_csv.html
@dburkhardt
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Looks like this was introduced with pola-rs/polars@4af49ae in pola-rs/polars#2026

@dburkhardt
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Confirmed the API changed in v0.11 on PyPI: https://pypi.org/project/polars/0.11.0/#files

dburkhardt added a commit to dburkhardt/pycisTopic that referenced this issue Jan 30, 2023
@dburkhardt
Fix aertslab#57 - update pl.read_csv
970ef10
@dburkhardt dburkhardt mentioned this issue Jan 30, 2023
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cbravo93 added a commit that referenced this issue Jan 31, 2023
@cbravo93
Merge pull request #58 from dburkhardt/master
219225d 
Update pl.read_csv call (#57) + peak_calling bugfix (#61)
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