Hi there 👋
You may also see my website – abolfazlarab.com
Here are my key projects where I led the effort.
- ezformer | Run enformer like models, get prediction tracks, and perform benchmarking (not public!)
- Cancer-Cell-Encoder | (ARCHIVED)
- FunGI-cap – Functional Genomics Screening Datasets, Tools, and Resources
- ArcInstitute/ScreenPro2 | Flexible analysis of high-content CRISPR screening
- GilbertLabUCSF/CanDI | Cancer Data Integrator
- pager | PAGE algorithm run and downstream analysis
Projects at Harvard Medical School - DBMI and Zitnik Lab:
- UDNBioSimilarity | Investigating Biological Similarities among Rare Diseases (not public!)
- mims-harvard/TDC | Artificial intelligence foundation for therapeutic science
- mims-harvard/PrimeKG | Precision Medicine Knowledge Graph (PrimeKG)