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    42 repositories

    • natural_products_libraries

      Public
      Mass spectral and retention times libraries for natural products
      0•1•0•0•Updated May 23, 2025May 23, 2025

    • sirius-API

      Public
      The Sirius API Wrapper backend for LCB
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 14, 2025May 14, 2025

    • sirius-client

      Public
      The SIRIUS API Wrapper client built using Java, Springboot, and Maven.
      Java
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 12, 2025May 12, 2025

    • ei-ci-merge

      Public
      Python
      •
      GNU Lesser General Public License v2.1
      •0•0•0•0•Updated May 8, 2025May 8, 2025

    • masscube

      Public
      Python
      •
      Other
      •5•0•0•0•Updated Feb 25, 2025Feb 25, 2025

    • monitor

      Public
      Raw data file monitoring, conversion and upload
      Python
      •0•1•0•0•Updated Jan 16, 2025Jan 16, 2025

    • ctsproxy

      Public
      Scalable proxy for the CTS with an AngularJS web application
      HTML
      •0•0•0•4•Updated Oct 11, 2024Oct 11, 2024

    • Delilah-AMDB

      Public
      This holds the python file containing the Aging Metabolome Database and the files used by the database.
      Python
      •0•0•0•0•Updated Sep 6, 2024Sep 6, 2024

    • ChemRICH

      Public
      Chemical Similarity Enrichment analysis of metabolomics datasets
      R
      •14•0•0•0•Updated Jul 19, 2024Jul 19, 2024

    • mona-ng-libraries

      Public
      Public Angular libraries relating to MoNA
      TypeScript
      •
      Other
      •0•0•0•0•Updated Nov 22, 2023Nov 22, 2023

    • MSEntropy

      Public
      Spectral entropy for mass spectrometry data.
      Python
      •
      Apache License 2.0
      •7•1•0•0•Updated Nov 14, 2023Nov 14, 2023

    • mona

      Public
      MassBank of North America (MoNA) is a metadata-centric, auto-curating repository designed for efficient storage and querying of mass spectral records. The MoNA server is a set of Spring microservices written in Scala and Java utilizing MongoDB and ElasticSearch for data storage and RabbitMQ for messaging. The front-end is an Angular 10 web appli…
      Scala
      •
      GNU Lesser General Public License v3.0
      •0•19•11•0•Updated Nov 1, 2023Nov 1, 2023

    • Libgen_stable

      Public
      stable version of libgen 2.0
      Python
      •
      Apache License 2.0
      •3•0•0•0•Updated Jul 17, 2023Jul 17, 2023

    • Libgen_demo

      Public
      HTML
      •1•0•0•0•Updated Jul 13, 2023Jul 13, 2023

    • metadatastandardizer

      Public
      Python
      •0•4•1•0•Updated Jul 7, 2023Jul 7, 2023

    • bindiscover

      Public
      https://bindiscover.metabolomics.us
      Jupyter Notebook
      •1•1•0• 10000 0•Updated Jun 3, 2023Jun 3, 2023

    • msp-from-ss

      Public
      Creating .msp files from spreadsheets of mass spectrometry data
      CSS
      •0•1•0•30•Updated Jan 7, 2023Jan 7, 2023

    • carrot-control-panel

      Public
      TypeScript
      •0•1•0•29•Updated Jan 6, 2023Jan 6, 2023

    • MSquickQC

      Public
      R
      •0•0•0•0•Updated Nov 15, 2022Nov 15, 2022

    • mona-skeleton-config

      Public
      Public skeleton for setting up MoNA's microservices
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 31, 2022Mar 31, 2022

    • angular-cts-service

      Public
      A small angular module to query the CTS and Chemify system from angular JS based applications
      TypeScript
      •0•0•0•0•Updated Mar 15, 2022Mar 15, 2022

    • angular-mgf-parser

      Public
      This is a MGF file parser for Angular JS
      TypeScript
      •0•0•0•0•Updated Oct 11, 2021Oct 11, 2021

    • angular-masspec-plotter

      Public
      This is a mass spectrum plotter for AngularJS using Flot (Used in MoNA project)
      TypeScript
      •0•2•0•0•Updated Oct 11, 2021Oct 11, 2021

    • angular-massbank-parser

      Public
      AngularJS parser for MassBank Records files (Used in the MoNA Project)
      TypeScript
      •0•0•0•0•Updated Oct 11, 2021Oct 11, 2021

    • angular-msp-parser

      Public
      An msp file parser for angularjs. This just provides a service for easy access
      TypeScript
      •0•1•0•0•Updated Oct 11, 2021Oct 11, 2021

    • docker-nginx-letsencrypt

      Public
      A single Docker image to get Nginx up with Letsencrypt Certificates with a single command
      Shell
      •20•1•0•0•Updated Sep 14, 2020Sep 14, 2020

    • pyspec

      Public
      This is a simple spectra analysis framework to compute some basic information and provide an easy way to access mzML files
      Python
      •
      GNU General Public License v3.0
      •3•0•0•1•Updated Jun 22, 2020Jun 22, 2020

    • Similarity-Scores

      Public
      Similarity Score Graphs for Consensus Spectra
      Python
      •0•0•0•0•Updated Apr 9, 2020Apr 9, 2020

    • TargetedQueueGeneration

      Public
      Generates instrument queues from sample lists for targeted platforms
      Python
      •0•0•0•0•Updated Mar 31, 2020Mar 31, 2020

    • lipid 3C74 -search

      Public
      pulls all known information (genes, enzymes, side-chains, etc)
      Python
      •0•0•0•0•Updated Mar 12, 2020Mar 12, 2020
    0