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    41 repositories

    • geome-ui

      Public
      TypeScript
      •5•3•71•0•Updated May 22, 2025May 22, 2025

    • biscicol-server

      Public
      Service endpoint code for searching PPO elasticsearch data
      JavaScript
      •1•2•3•13•Updated May 6, 2025May 6, 2025

    • ppo-data-interface

      Public
      Visual global plant phenology
      plantphenology
      JavaScript
      •6•0•5•0•Updated May 6, 2025May 6, 2025

    • geome-db

      Public
      Java
      •
      MIT License
      •1•2•23•0•Updated Apr 29, 2025Apr 29, 2025

    • biocode_website

      Public
      Code to build the Biocode website
      HTML
      •1•0•0•1•Updated Apr 28, 2025Apr 28, 2025

    • biocode-lims

      Public
      The Biocode LIMS plugin integrates Geneious with your lab workflow, allowing you to track processes through tissue sample, extraction, PCR, sequencing and assembly. It is best suited for large scale DNA barcoding efforts.
      Java
      •
      BSD 3-Clause "New" or "Revised" License
      •0•11•52•0•Updated Apr 14, 2025Apr 14, 2025

    • bcid

      Public
      Biocode Commons Identifiers
      Java
      •0•2•2•0•Updated Mar 13, 2025Mar 13, 2025

    • arctos_data

      Public
      Python
      •0•0•2•0•Updated Feb 11, 2025Feb 11, 2025

    • arctos_interface

      Public
      Interface for arctos
      JavaScript
      •1•0•0•0•Updated Feb 11, 2025Feb 11, 2025

    • geome-configurations

      Public
      Manage project configurations for geome
      Vue
      •0•1•1•0•Updated Dec 15, 2024Dec 15, 2024

    • geome-statistics

      Public
      HTML
      •0•0•0•0•Updated Nov 18, 2024Nov 18, 2024

    • localcontexts_json

      Public
      Python
      •0•0•0•0•Updated Oct 16, 2024Oct 16, 2024

    • localcontexts_db

      Public archive
      Local contexts back-end
      Python
      •
      Other
      •2•6•0•0•Updated Jan 25, 2024Jan 25, 2024

    • geome-scripts

      Public
      A place for monitoring scripts for GEOME
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Dec 6, 2023Dec 6, 2023

    • ppo-data-pipeline

      Public
      Python
      •0•4•2•9•Updated Oct 16, 2023Oct 16, 2023

    • ontology-data-pipeline

      Public
      A high-throughput ontology-based pipeline for data integration
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5•14•8•12•Updated May 17, 2023May 17, 2023

    • geomedb

      Public
      A set of R scripts for accessing and working with FIMS data from R
      R
      •2•2•2•0•Updated Nov 12, 2022Nov 12, 2022

    • trait-viz

      Public
      Visualize trait data
      JavaScript
      •0•0•0•0•Updated Aug 10, 2021Aug 10, 2021

    • query_fetcher

      Public
      Fetch data from a named graph using a SPARQL query you pass in
      Java
      •0•1•0•0•Updated Aug 7, 2021Aug 7, 2021

    • documentation

      Public
      Issues and Documentation on the FIMS family of services
      0•0•0•0•Updated Jul 29, 2021Jul 29, 2021

    • elk_pipeline

      Public
      Python
      •0•0•0•0•Updated Jul 23, 2021Jul 23, 2021

    • ror-parser

      Public archive
      Python script to parse ROR JSON file
      Python
      •0•0•0•0•Updated May 26, 2021May 26, 2021

    • localcontexts_ui

      Public
      User Interface for local contexts interface
      0•1•4•0•Updated May 12, 2021May 12, 2021

    • biocode-fims-tissues

      Public
      Java
      •0•1•0•0•Updated Jun 19, 2020Jun 19, 2020

    • biocode-fims-commons

      Public
      Biocode Field Information Management System
      Java
      •0•3•15•0•Updated Apr 27, 2020Apr 27, 2020

    • biocode-fims-photos

      Public
      Java
      •0•0•2•0•Updated Jan 27, 2020Jan 27, 2020

    • biocode-fims-evolution

      Public
      Plugin to integrate with Evolution API
      Java
      •0•0•0•0•Updated Nov 7, 2019Nov 7, 2019

    • biscicol-fims

      Public
      Biocode-Fims app at www.biscicol.org
      JavaScript
      •0•1•9•0•Updated Feb 28, 2019Feb 28, 2019

    • arms-fims

      Public
      Biocode FIMS backend for ARMS Interface
      JavaScript
      •0•0•7•0•Updated Dec 22, 2018Dec 22, 2018

    • gradle-fims

      Public
      Groovy
      •0•0•0•0•Updated Oct 8, 2018Oct 8, 2018
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