8000 Chaste repositories · GitHub

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Chaste - Cancer Heart and Soft Tissue Environment

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61 repositories

OpenVtPersistentRandomWalk
Public
Repo for the Persistent Random walk exemplar from the Open VT project
C++
•0•0•1•0•Updated May 19, 2025May 19, 2025
profiling-gprof
Public
Generated files from profiling with GProf on CI
HTML
•0•0•0•0•Updated May 13, 2025May 13, 2025
doxygen-latest
Public
GitHub pages site containing doxygen generated from the latest commit on develop
HTML
•0•0•0•0•Updated May 13, 2025May 13, 2025
Chaste
Public
Chaste - Cancer Heart And Soft Tissue Environment - main public repository.
c-plus-plus computational-biology electrophysiology mathematical-modelling hpc-applications cancer-research mathematical-biology developmental-biology cell-based physiology
C++
•
Other
•62•132•59•8•Updated May 13, 2025May 13, 2025
memory-testing
Public
Generated files from the memory testing CI
HTML
•0•0•0•0•Updated May 13, 2025May 13, 2025
CellBasedComparison2017
Public
Code for the 2017 Cell Based Comparison paper https://doi.org/10.1371/journal.pcbi.1005387
paper-tutorial migrated-from-svn
C++
•1•0•0•0•Updated May 12, 2025May 12, 2025
ApPredict
Public
Cardiac Action Potential Prediction (ApPredict) under drug-induced block of ion channels. This is a Chaste extension/bolt-on project.
drug-discovery electrophysiology mathematical-modelling biophysics cardiac ion-channel drug-safety chaste
C++
•
Other
•4•7•3•0•Updated Apr 23, 2025Apr 23, 2025
chaste-codegen-sbml
Public
Chaste C++ code generation from SBML
C++
•
BSD 3-Clause "New" or "Revised" License
•0•0•11•1•Updated Apr 3, 2025Apr 3, 2025
dependency-modules
Public
Environment modules for Chaste dependencies
Shell
•
Other
•0•1•3•0•Updated Mar 20, 2025Mar 20, 2025
cellml
Public
Some copies of cellml.org electrophysiology models with metadata annotations for use with Chaste, ApPredict and WebLab
5•7•1•0•Updated Feb 25, 2025Feb 25, 2025
chaste-workshop-materials-2025
Public
Materials for the 2025 Chaste workshop in Nottingham
BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated Feb 20, 2025Feb 20, 2025
chaste-docker
Public
Docker images for Chaste
windows macos linux docker dockerfile simulation docker-container docker-image chaste
Dockerfile
•
MIT License
•9•10•7•1•Updated Feb 14, 2025Feb 14, 2025
doxygen-releases
Public
GitHub pages site containing static doxygen for individual releases
HTML
•0•0•0•0•Updated Feb 3, 2025Feb 3, 2025
ImmersedBoundaryWorkshop
Public
Chaste / Oxford 2023 - Immersed Boundary Workshop Code
C++
•0•0•0•0•Updated Jan 9, 2025Jan 9, 2025
IntroToChasteCpp2025
Public
An introduction to using Chaste from C++ for the 2025 Nottingham Workshop
C++
•2•0•0•0•Updated Jan 9, 2025Jan 9, 2025
PyChaste
Public
A Python Wrapper for Chaste
C++
•
Other
•0•2•7•2•Updated Jan 8, 2025Jan 8, 2025
OpenVT
Public
OpenVT reference model implementations in Chaste
C++
•0•0•0•0•Updated Jan 7, 2025Jan 7, 2025
gpu-benchmark-2024
Public
Cuda
•0•0•0•0•Updated Dec 10, 2024Dec 10, 2024
cppwg
Public
An automatic Python wrapper generator for C++ code.
Python
•
BSD 3-Clause "New" or "Revised" License
•8•46•7•0•Updated Nov 26, 2024Nov 26, 2024
PerMedCoE
Public
PerMedCoE community benchmarking code for the Chaste project
C++
•1•2•0•0•Updated Jul 10, 2024Jul 10, 2024
project_FunctionalCuration
Public
Git conversion of old SVN user project FunctionalCuration
C++
•0•0•0•0•Updated Jul 8, 2024Jul 8, 2024
project_Wisc2013
Public
Git conversion of old SVN user project Wisc2013
C++
•0•0•0•0•Updated Jul 8, 2024Jul 8, 2024
project_CardiacEpVerification
Public
Git conversion of old SVN user project CardiacEpVerification
C++
•0•0•0•0•Updated Jul 5, 2024Jul 5, 2024
IntroToChasteCpp
Public
An introduction to using Chaste from C++
C++
•2•1•1•0•Updated May 9, 2024May 9, 2024
project_DanieleM
Public
Git conversion of old SVN user project DanieleM
C++
•0•0•0•0•Updated May 2, 2024May 2, 2024
project_PlosOne_mRNA
Public
Git conversion of old SVN user project PlosOne_mRNA
MATLAB
•0•0•0•0•Updated May 2, 2024May 2, 2024
project_Plos2013
Public
Git conversion of old SVN user project Plos2013
C++
•0•0•0•0•Updated May 2, 2024May 2, 2024
project_Plos2012
Public
Git conversion of old SVN user project Plos2012
C++
•0•0•0•0•Updated May 2, 2024May 2, 2024
project_PNAS_PopulationOfModels
Public
Git conversion of old SVN user project PNAS_PopulationOfModels
C++
•0•0•0•0•Updated May 2, 2024May 2, 2024
project_MouseLesion
Public
Git conversion of old SVN user project MouseLesion
C++
•0•0•0•0•Updated May 2, 2024May 2, 2024

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