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flexplot: graphical data analysis

TeX 84 19 Updated May 23, 2025

CoMarker is a standardised, reproducible image analysis pipeline which was built to vastly decrease the time taken to assess the colocalisation of tissue markers, whilst eliminating subjectivity an…

ImageJ Macro 2 Updated Mar 23, 2023

Supplementary data and analyses for the package psupertime

R 3 Updated Sep 9, 2019

psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels

R 40 14 Updated Jul 20, 2022

Please consider using/contributing to https://github.com/nf-core/scdownstream

Nextflow 25 11 Updated Jun 13, 2024

Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.

R 121 38 Updated May 28, 2020

Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.

R 56 13 Updated Feb 21, 2024

A 'ggplot2' implement of Venn Diagram.

R 297 42 Updated Oct 23, 2024
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