8000 Fix linting, add sentence on usage by christopher-mohr · Pull Request #27 · nf-core/nanostring · GitHub
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Fix linting, add sentence on usage #27

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Merged
merged 3 commits into from
Jun 12, 2023
Merged

Fix linting, add sentence on usage #27

merged 3 commits into from
Jun 12, 2023

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christopher-mohr
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PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • If necessary, also make a PR on the nf-core/nanostring branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

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github-actions bot commented Jun 12, 2023 •
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nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit bb18590

+| ✅ 158 tests passed       |+
!| ❗   3 tests had warnings |!

❗ Test warnings:

  • readme - README contains the placeholder zenodo.XXXXXXX. This should be replaced with the zenodo doi (after the first release).
  • pipeline_todos - TODO string in README.md: Add citation for pipeline after first release. Uncomment lines below and update Zenodo doi and badge at the top of this file.
  • pipeline_todos - TODO string in WorkflowMain.groovy: Add Zenodo DOI for pipeline after first release

✅ Tests passed:

Run details

  • nf-core/tools version 2.8
  • Run at 2023-06-12 09:14:54

apeltzer
apeltzer reviewed Jun 12, 2023
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@apeltzer apeltzer merged commit 3328645 into nf-core:dev Jun 12, 2023
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@apeltzer apeltzer apeltzer approved these changes

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