This package enables the transfer of structure related objects from Biotite to PyMOL for visualization, via PyMOL's Python API:
- Import
AtomArrayandAtomArrayStackobjects into PyMOL - without intermediate structure files. - Convert PyMOL objects into
AtomArrayandAtomArrayStackinstances. - Use Biotite's boolean masks for atom selection in PyMOL.
- Display images rendered with PyMOL in Jupyter notebooks.
Have a look at this example:
PyMOL is a trademark of Schrodinger, LLC.