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@nanoporetech

Oxford Nanopore Technologies

Direct DNA/RNA analysis for anyone, anywhere.

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  1. dorado dorado Public

    Oxford Nanopore's Basecaller

    C++ 682 86

  2. remora remora Public

    Methylation/modified base calling separated from basecalling.

    Python 176 22

  3. medaka medaka Public

    Sequence correction provided by ONT Research

    Python 462 81

  4. pod5-file-format pod5-file-format Public

    Pod5: a high performance file format for nanopore reads.

    C++ 149 20

  5. fast-ctc-decode fast-ctc-decode Public

    Blitzing Fast CTC Beam Search Decoder

    Rust 183 27

  6. bonito bonito Public

    A PyTorch Basecaller for Oxford Nanopore Reads

    Python 417 124

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