8000 MSKCC Omics Workflows · GitHub
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@mskcc-omics-workflows

MSKCC Omics Workflows

The MSKCC Omics Workflow development group's mission is to collabratively develop workflows using NextFlow.

Welcome 👋

The MSKCC Omics Workflow development group's mission is to develop collaborative workflows using Nextflow and nf-core.

📚 See available modules and subworkflow on the website.

👩‍💻 Check out the documentation.

🌈 Please abide by our community code of conduct

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  1. modules modules Public

    A repository for hosting Nextflow DSL2 module files containing tool-specific process definitions and their associated documentation for MSKCC

    Python 11 6

  2. test-datasets test-datasets Public

    1

  3. containers containers Public

    Mono-repository for custom docker containers used in nextflow modules

    Dockerfile

  4. nextflow-training nextflow-training Public

    Training materials for an introduction to nextflow and nf-core.

    Nextflow 1 1

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