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fwdpy11 Public
Forward-time simulation in Python using fwdpp
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demes-rs Public
rust tools for the demes ecosystem
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popgen_notes Public
Repository for generating class notes on population genetics
Python UpdatedJan 8, 2025 -
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tskit Public
Forked from tskit-dev/tskittskit provides a C and Python API for accessing, analysing and creating tree sequences - a highly efficient way of storing a set of related DNA sequences.
Python MIT License UpdatedFeb 5, 2024 -
efficient_edge_recording Public
Example of efficient edge recording in forward simulation
Rust UpdatedFeb 1, 2024 -
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ancestry_graph Public
(Yet another) prototype of a new method for ancestry update
Rust UpdatedNov 30, 2023 -
list_container Public
Designing a container to hold many linked lists and use Vec to back the memory.
Rust UpdatedJul 21, 2023 -
unique_item_benchmarks Public
Benchmarking methods of tracking unique integers (rust)
Rust UpdatedJun 5, 2023 -
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edge_buffering_explanation Public
Pure Python description of efficient edge buffering
Jupyter Notebook UpdatedJan 30, 2023 -
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tskit_parallel_presentation Public
Slides for tskit-dev presentation
Jupyter Notebook UpdatedDec 7, 2022 -
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OpenCL-AMD-Fedora Public
Forked from sukhmeetbawa/OpenCL-AMD-FedoraAMD OpenCL userspace drivers for Fedora.
Shell UpdatedJul 29, 2022 -
dynamic-ts Public
Forked from jeromekelleher/dynamic-tsDynamic tree sequences for forward simulations
Python MIT License UpdatedMay 31, 2022 -
msprime_remark_examples Public
examples of using msprime to provide slide content via pyodide
JavaScript UpdatedMay 28, 2022 -
pybind11_with_static_archive Public
Experimenting with separating back end from pybind11 modules
CMake UpdatedMay 23, 2022
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