8000 mgymrek (Melissa Gymrek) / Starred · GitHub
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Text Only Genome Viewer!

Java 221 16 Updated May 12, 2025

Python package to simulate and estimate Y-STR mutation models

Python 4 2 Updated Apr 28, 2016

Embeddable genomic visualization component based on the Integrative Genomics Viewer

HTML 675 8000 234 Updated May 27, 2025

Toolkit for processing sequences in FASTA/Q formats

C 1,464 312 Updated Aug 10, 2024

THIS IS THE **OLD** PYMC PROJECT (VERSION 2). PLEASE USE PYMC INSTEAD:

Fortran 878 228 Updated Jul 30, 2020
Python 43 2 Updated Apr 20, 2016

Resumes generated using the GitHub informations

JavaScript 62,468 1,359 Updated Feb 15, 2023

bedtools - the swiss army knife for genome arithmetic

C 979 292 Updated Mar 11, 2025

Extracts FIT files from ANT-FS based sport watches such as Garmin Forerunner 60, 405CX, 310XT, 610 and 910XT.

Python 307 76 Updated Mar 13, 2022

mirror of GNU Datamash. Send questions/comments/bugs to bug-datamash@gnu.org

C 75 6 Updated Apr 4, 2025

🎓 A collection of interactive courses for the swirl R package.

R 4,424 7,247 Updated Jan 10, 2024
HTML 23 6 Updated Apr 16, 2016

Functional genomics and genome-wide association studies

C++ 67 13 Updated Jul 24, 2018

Statistical data visualization in Python

Python 13,157 1,998 Updated Jan 26, 2025

Incubator for useful bioinformatics code, primarily in Python and R

Python 623 243 Updated Feb 5, 2025

Export d3js graphics to PDF/PNG/SVG

JavaScript 212 88 Updated Jun 17, 2015

Generate stochastic processes using Python. Unfortunately not maintained any longer =(

Python 111 46 Updated Mar 2, 2015

a minimal C++ interval tree implementation

C++ 230 70 Updated Mar 11, 2021

Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")

Python 319 106 Updated Mar 16, 2025

Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…

Cython 829 285 Updated May 28, 2025
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