Stars
Generic targeted local assembler and genotyper for long-read data
Tandem Repeats Finder: a program to analyze DNA sequences
Alignment-free method for genotyping and characterizing STR alleles
FULL v0, Cursor, Manus, Same.dev, Lovable, Devin, Replit Agent, Windsurf Agent, VSCode Agent, Dia Browser & Trae AI (And other Open Sourced) System Prompts, Tools & AI Models.
This repos contains notebooks for the Advanced Solutions Lab: ML Immersion
Train your AI self, amplify you, bridge the world
Autonomous coding agent right in your IDE, capable of creating/editing files, executing commands, using the browser, and more with your permission every step of the way.
This project includes a CNN-based algorithm for automatic detection of new MS lesions on FLAIR MRI data and a CGAN based approach for data augmentation.
Utilities to download and load an MRI brain tumor dataset with Python, providing 2D slices, tumor masks and tumor classes.
Predicting Alzheimer's disease from MRI images and patient demographic information
The purpose of this paper is to detect Alzheimer’s Disease using Deep Learning and Machine Learning algorithms on the early basis which is being further optimized using CSA(Crow Search Algorithm). …
A CNN-LSTM deep learning model for prognostic prediction and classification of Alzheimer's MRI neuroimages.
Code for "Generalizable deep learning model for early Alzheimer’s disease detection from structural MRIs"
R package to streamline use of the AllofUs researcher workbench
Repository with code for the analysis of pathogenic STRs in the 1000G ONT resequencing data
A curated list of awesome nanopore analysis tools.
GCP for Bioinformatics Researchers
Augmented ImageMask Dataset for Brain MRI Dataset of Multiple Sclerosis with Consensus Manual Lesion Segmentation and Patient Meta Information
Automated deep learning based segmentation of multiple sclerosis lesions on MRI
Uncovering convolutional neural network decisions for diagnosing multiple sclerosis on conventional MRI using layer-wise relevance propagation
A high-quality tool for convert PDF to Markdown and JSON.一站式开源高质量数据提取工具，将PDF转换成Markdown和JSON格式。
Code for Residual and Plain Convolutional Neural Networks for 3D Brain MRI Classification paper
Master thesis: Convolutional Neural Networks for Classification of Alzheimer’s Disease and Mild Cognitive Impairment from 3D Brain MRI Images. MRI image data obtained from: http://adni.loni.usc.edu/