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MCell Team

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  1. cellblender cellblender Public

    Create, Simulate, Visualize, and Analyze Realistic 3D Cell Models

    Python 64 13

  2. mcell mcell Public

    MCell Monte Carlo Simulator of Cellular Microphysiology

    C++ 35 11

  3. swc_mesher swc_mesher Public

    Creates a Blender Object from an SWC formatted file

    Python 10 7

  4. gamer-v1 gamer-v1 Public

    Geometry-preserving Adaptive Mesh Generator

    C++ 8 6

  5. neuron_launcher neuron_launcher Public

    Set of tools in Blender to create models for MCell/Neuron hybrid simulations

    C++ 7 2

  6. mesh_tools mesh_tools Public

    A collection of tools for processing and analyzing surface meshes for use with MCell/CellBlender

    Forth 6 1

Repositories

Showing 10 of 39 repositories
  • gamer Public Forked from ctlee/gamer

    Geometry-preserving Adaptive Mesher

    mcellteam/gamer’s past year of commit activity
    C++ 0 12 0 0 Updated May 2, 2025
  • mcell_tools Public

    Package build repository

    mcellteam/mcell_tools’s past year of commit activity
    Python 2 0 0 0 Updated May 2, 2025
  • nfsimCInterface Public Forked from RuleWorld/nfsimCInterface

    A C interface for the NFSim API

    mcellteam/nfsimCInterface’s past year of commit activity
    C++ 0 MIT 2 0 0 Updated May 2, 2025
  • nfsim Public Forked from RuleWorld/nfsim

    A general-purpose, stochastic, biochemical reaction simulator for large reaction networks

    mcellteam/nfsim’s past year of commit activity
    C++ 0 MIT 18 0 0 Updated May 2, 2025
  • neuropil_tools Public

    Blender addon to automate annotation and analysis of dendritic spines and axons in neuropil. Requires installation of CellBlender.

    mcellteam/neuropil_tools’s past year of commit activity
    Python 3 1 9 0 Updated May 2, 2025
  • mesh_tools Public

    A collection of tools for processing and analyzing surface meshes for use with MCell/CellBlender

    mcellteam/mesh_tools’s past year of commit activity
    Forth 6 1 0 0 Updated May 2, 2025
  • mcell_tests Public

    New tests for MCell4

    mcellteam/mcell_tests’s past year of commit activity
    Python 2 1 0 0 Updated May 2, 2025
  • mcell Public

    MCell Monte Carlo Simulator of Cellular Microphysiology

    mcellteam/mcell’s past year of commit activity
    C++ 35 11 10 4 Updated May 2, 2025
  • libbng Public

    BioNetGen library

    mcellteam/libbng’s past year of commit activity
    C++ 1 1 0 0 Updated May 2, 2025
  • cellblender Public

    Create, Simulate, Visualize, and Analyze Realistic 3D Cell Models

    mcellteam/cellblender’s past year of commit activity
    Python 64 GPL-2.0 13 35 2 Updated May 2, 2025
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