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Issues: YuanTian1991/ChAMP

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Issues list

ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix
#59 opened Apr 29, 2025 by AndChris27
6
champ.load vs. champ.import
#58 opened Feb 27, 2025 by keenhl
How to install previous version of ChAMP
#57 opened Jan 27, 2025 by keenhl
Error in champ.refbase
#56 opened Nov 27, 2024 by BenjaminDEMAILLE
Error in champ.import(directory, arraytype = arraytype) : Meth Matrix and UnMeth Matrix seems not paried correctly
#55 opened Oct 1, 2024 by Abanas14
5
EPICv1 and EPICv2 in one analysis
#54 opened Sep 16, 2024 by anastasiaprime
Beta valued excel file
#52 opened Jul 5, 2024 by TahirahYasmin
Request for support of new Illumina 270K methylation chip
#51 opened Jun 7, 2024 by shenzhongjun
GSEA analysis with ChAMP
#50 opened May 22, 2024 by yiyi1247
champ.DMP output with significant positions, but output has zero lines
#48 opened Apr 17, 2024 by biofuture
EPICv2 still not working?
#47 opened Feb 23, 2024 by justinejacobi
1
Different result from champ.filter() function with the same dataset
#46 opened Jan 31, 2024 by thscandolara
Error in Champ.DMP()
#45 opened Jan 10, 2024 by debangana234
关于导入probe.features.epicv1
#44 opened Jan 10, 2024 by shenzhongjun
1
Bug: In champ.import (ChAMP "2.30.0")
#43 opened Oct 30, 2023 by MitaliKatoch
6
ChAMP data and EPIC v2 arrays
#42 opened Oct 6, 2023 by keenhl
1
Apply combat and refbase on EPIC v2 data
#41 opened Oct 6, 2023 by keenhl
champ.filter Filtering probes on EPICv1
#40 opened Sep 22, 2023 by robinjugas
1
Check of class of beta matrix in champ.SVD returns error since R 4.0.0
#39 opened May 24, 2023 by sarah-voisin
4
EPICv2 chip not supported
#37 opened May 10, 2023 by shenzhongjun
8
Error with champ.CNA processing
#36 opened Mar 29, 2023 by thscandolara
Fix bug in filter function when autoimpute is FALSE
#35 opened Mar 20, 2023 by YuanTian1991
Replace EstDimRMT with EstDimRMTv2 across all function
#34 opened Feb 19, 2023 by YuanTian1991
Bad error handling when no diff results reported
#33 opened Feb 3, 2023 by ShixiangWang
Debugging champ.norm
#32 opened Jan 23, 2023 by iskandari
1
ProTip! Updated in the last three days: updated:>2025-05-21.
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