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- DeepDifE Public
VIB-PSB/DeepDifE’s past year of commit activity - ksrates Public
ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-ortholog Ks distributions.
VIB-PSB/ksrates’s past year of commit activity - MINI-AC Public
Motif-Informed Network Inference based on Accessible Chromatin (MINI-AC) is a method that combines accessible chromatin data from bulk or single-cell experiments with transcription factor binding site enrichment to learn gene regulatory networks in plants
VIB-PSB/MINI-AC’s past year of commit activity - wheat_root_atlas Public
VIB-PSB/wheat_root_atlas’s past year of commit activity - MINI-EX Public
Motif-Informed Network Inference of cell type-specific gene regulatory networks in plants
VIB-PSB/MINI-EX’s past year of commit activity - BirthDeathModel Public
Reciprocally retained genes in the angiosperm lineage show the hallmarks of dosage balance sensitivity
VIB-PSB/BirthDeathModel’s past year of commit activity - cross_species_annotation_transfer Public
Framework for transferring single-cell cluster annotations cross-species
VIB-PSB/cross_species_annotation_transfer’s past year of commit activity - i-ADHoRe Public
i-ADHoRe is a highly sensitive software tool to detect degenerated homology relations within and between different genomes.
VIB-PSB/i-ADHoRe’s past year of commit activity - OrthoMCLight Public
OrthoMCLight is an edited version of OrthoMCL v1.4 that requires less memory and has a faster runtime. It is a genome-scale algorithm for grouping orthologous protein sequences.
VIB-PSB/OrthoMCLight’s past year of commit activity
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