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Python 72 10 Updated Jun 3, 2025

This GitHub repository shares the scripts in Julia and Python programming languages that are used for the work entitled "Physically Constrained Mass Spectrometry Data Binning on Multi-Platform Unt…

Jupyter Notebook 1 Updated Mar 6, 2025

This GitHub repository shares the scripts in Julia programming language that are used for model development and data visualization according to the research article "Machine Learning for Enhanced I…

Jupyter Notebook 1 Updated Feb 10, 2025

This GitHub repository shares the scripts in Julia programming language that are used for model deployment and exposome identification according to the research article "Machine Learning for Enhanc…

Julia 1 Updated Feb 10, 2025

MassSpecGym: A benchmark for the discovery and identification of molecules (NeurIPS 2024 Spotlight)

Jupyter Notebook 73 9 Updated May 9, 2025

A user-friendly web application for tidymass

R 6 Updated Jun 6, 2025

The repository shares the Jupyter Notebook files that are used for image recognition according to the protocol in the article "Integration of animal behavioral assessment and convolutional neural n…

Jupyter Notebook 1 Updated Nov 7, 2024
Python 66 17 Updated Aug 21, 2024

Autonomous and accurate clustering of co-localized ion images in a self-supervised manner.

Jupyter Notebook 11 6 Updated Dec 22, 2021

This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based metabolomics

HTML 47 19 Updated Mar 20, 2025

mzmine source code repository

Java 227 138 Updated Jun 5, 2025

Code for U-within-U-Net deep learning on hyperspectral images

Jupyter Notebook 45 7 Updated Jun 17, 2024

The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry centric fashion.

Python 47 10 Updated Dec 12, 2024

Predicting RP-LC retention indices of structurally unknown chemicals from mass spectrometry data

Jupyter Notebook 6 2 Updated Feb 27, 2023

🎮 2048 game developed using javascript

JavaScript 101 40 Updated May 11, 2023
Jupyter Notebook 1 1 Updated Oct 7, 2024

This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis

R 200 82 Updated May 27, 2025

A community-curated list of resources related to self-driving labs which combine hardware automation and artificial intelligence to accelerate scientific discovery.

TeX 161 25 Updated May 9, 2025

Microcourses hosted by the Acceleration Consortium for self-driving lab topics.

Jupyter Notebook 30 3 Updated May 27, 2025
HTML 37 19 Updated Mar 14, 2025

Open-source C++ and Python module for opening binary timsTOF data files.

C 48 14 Updated May 21, 2025

Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics

HTML 119 7 Updated May 3, 2025

Classification and Ranking Analysis using Neural network generates Knowledge from Mass Spectrometry

Python 29 4 Updated Jan 19, 2024

FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks

Jupyter Notebook 38 28 Updated Feb 18, 2025
Jupyter Notebook 7 3 Updated Feb 23, 2022
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