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Metagenomic classification using Transformer

Python 5 Updated Aug 23, 2023

Repository for the T2D/obesity experiments run in the Metapheno paper

Python 15 2 Updated Feb 6, 2019

A deep learning based approach to predict Antibiotic Resistance Genes (ARGs) from metagenomes. It provides two models,deepARG-SS and deepARG-LS.

Python 38 5 Updated Nov 15, 2023

DeepMicrobes: taxonomic classification for metagenomics with deep learning

Python 95 21 Updated Sep 17, 2022

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome

Python 673 170 Updated Mar 9, 2024

GENA-LM is a transformer masked language model trained on human DNA sequence.

Jupyter Notebook 196 20 Updated Jun 19, 2025

贵校课程资料民间整理

TeX 32,157 8,291 Updated Jan 5, 2022

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HTML 38,666 9,502 Updated Mar 9, 2025

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68,863 3,464 Updated Jun 12, 2025

Recommend new arxiv papers of your interest daily according to your Zotero libarary.

Python 1,402 1,262 Updated May 30, 2025

A toolkit of spatial transcriptomic analysis.

Jupyter Notebook 252 69 Updated Jun 18, 2025

MAGI-1: Autoregressive Video Generation at Scale

Python 3,296 193 Updated Jun 17, 2025

AI Toolkit for Healthcare Imaging

Python 6,516 1,198 Updated Jun 14, 2025

The AI sensor processing SDK for low latency streaming workflows

C++ 152 40 Updated May 29, 2025

Accelerated genomics workflows in the Workflow Description Language

WDL 33 5 Updated Apr 2, 2024

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Python 3,432 753 Updated May 16, 2025

An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

R 509 107 Updated May 21, 2024

Sequence correction provided by ONT Research

Python 462 81 Updated May 23, 2025

Oxford Nanopore's Basecaller

C++ 682 86 Updated Jun 11, 2025

Collect some World Models for Autonomous Driving (and Robotic) papers.

1,080 38 Updated Jun 15, 2025

SoS workflow system for daily data analysis

Python 279 46 Updated Oct 17, 2024

Open source web interface for Slurm HPC & AI clusters

Python 440 108 Updated Jun 19, 2025

Analysis of Phylogenetics and Evolution

R 70 12 Updated Jun 3, 2025

Bioinformatics code libraries and scripts

Python 528 253 Updated Feb 11, 2025
JavaScript 629 2,109 Updated Mar 20, 2025

《剑指Offer》面试题Python实现

Python 2,257 592 Updated Mar 9, 2019

关于Python的面试题

Shell 16,918 5,559 Updated Mar 5, 2025

AIHawk aims to easy job hunt process by automating the job application process. Utilizing artificial intelligence, it enables users to apply for multiple jobs in a tailored way.

Python 28,325 4,272 Updated May 28, 2025
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